Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P13231

Metabolite ID
P13231
Deionized mass
324.0635 Da
Average m/z
325.0717
Average RT
11.3978
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
121
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

121 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 4Chr19:1134716–1143232 (+)9.913e-14
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)2.063e-13
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.493e-11
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)1.134e-12
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)3.978e-12
Glyma.02G277200 hypothetical protein AT5G12290:DGS1:dgd1 suppressor 1 2Chr02:45999642–46007578 (+)3.942e-11
Glyma.06G213600 hypothetical protein NA 2Chr06:21713618–21726865 (+)7.038e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)6.218e-16
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)4.333e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)5.597e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)6.801e-13
Glyma.16G121500 hypothetical protein NA 2Chr16:27007186–27010856 (+)1.401e-12
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)4.082e-13
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)1.363e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)2.421e-12
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)2.063e-13
Glyma.01G167600 hypothetical protein AT5G66290:AT5G66290:uncharacterized protein 1Chr01:50524157–50528111 (-)6.038e-11
Glyma.01G234100 hypothetical protein AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein 1Chr01:56022128–56026001 (+)1.459e-11
Glyma.02G277400 hypothetical protein AT2G26770:SCAB1:plectin-like protein 1Chr02:46014763–46020988 (-)6.589e-11
Glyma.02G277500 hypothetical protein AT1G54140:TAFII21:TATA binding protein associated factor 21kDa subunit 1Chr02:46027755–46029924 (+)6.589e-11
Glyma.02G303600 hypothetical protein NA 1Chr02:47883626–47887124 (-)2.79e-12
Glyma.02G303700 hypothetical protein NA 1Chr02:47892900–47896207 (+)2.79e-12
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 1Chr02:47908136–47915999 (-)2.79e-12
Glyma.02G304500 hypothetical protein AT5G48300:ADG1:ADP glucose pyrophosphorylase 1 1Chr02:47950037–47954106 (+)9.748e-11
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr03:1683395–1688893 (-)2.756e-12
Glyma.03G017800 hypothetical protein AT4G00770:TRM9:DUF4378 domain protein 1Chr03:1780719–1783735 (+)1.338e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)3.737e-11
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 1Chr03:1875182–1876855 (+)2.505e-11
Glyma.03G019700 hypothetical protein AT3G61130:GAUT1:galacturonosyltransferase 1 1Chr03:2010835–2018418 (+)4.717e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)1.397e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)2.544e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.716e-13
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)2.539e-12
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)1.817e-11
Glyma.04G158400 hypothetical protein AT3G42660:AT3G42660:transducin family protein / WD-40 repeat family protein 1Chr04:38560905–38571145 (-)6.608e-11
Glyma.04G160700 hypothetical protein AT1G18610:AT1G18610:Galactose oxidase/kelch repeat superfamily protein 1Chr04:39818871–39825716 (+)6.608e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.443e-16
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.131e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.131e-12
Glyma.06G209300 hypothetical protein NA 1Chr06:20573671–20581076 (-)8.423e-11
Glyma.06G211800 hypothetical protein NA 1Chr06:21237649–21239875 (+)7.038e-12
Glyma.06G212000 hypothetical protein NA 1Chr06:21249851–21261691 (+)7.038e-12
Glyma.06G212900 hypothetical protein NA 1Chr06:21420130–21421143 (-)7.038e-12
Glyma.06G213300 hypothetical protein NA 1Chr06:21548690–21565666 (-)7.038e-12
Glyma.06G213700 hypothetical protein NA 1Chr06:21727968–21730998 (+)7.038e-12
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)6.972e-12
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)2.527e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)2.421e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)2.527e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)2.527e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)2.421e-12
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)4.356e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)3.155e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)4.629e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)6.027e-17
Glyma.07G019900 hypothetical protein AT1G79870:AT1G79870:D-isomer specific 2-hydroxyacid dehydrogenase family protein 1Chr07:1561952–1564494 (+)1.537e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)9.761e-13
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)3.755e-11
Glyma.08G039600 hypothetical protein NA 1Chr08:3107698–3116601 (-)3.218e-15
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)3.876e-12
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)3.876e-12
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)1.029e-11
Glyma.08G215400 hypothetical protein AT2G22750:AT2G22750:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:17463087–17467014 (+)4.006e-12
Glyma.08G215500 hypothetical protein AT2G22750:AT2G22750:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:17476921–17480079 (+)4.006e-12
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)1.506e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)4.683e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.416e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)4.896e-14
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)6.04e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)2.652e-12
Glyma.09G269100 hypothetical protein NA 1Chr09:48651429–48653656 (-)5.418e-11
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)2.134e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)1.268e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.439e-11
Glyma.10G082100 hypothetical protein AT3G05680:EMB2016:embryo defective 2016 1Chr10:9934486–9960586 (-)1.427e-11
Glyma.10G172600 hypothetical protein AT5G41900:AT5G41900:alpha/beta-Hydrolases superfamily protein__AT1G64670:BDG1:alpha/beta-Hydrolases superfamily protein 1Chr10:40628401–40633140 (-)4.837e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)6.432e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.596e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)2.52e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)2.52e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)2.52e-11
Glyma.11G162500 hypothetical protein AT2G40435:AT2G40435:transcription factor SCREAM-like protein 1Chr11:15087390–15090683 (-)2.794e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.853e-15
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.853e-15
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.493e-11
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)9.932e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)4.911e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.944e-13
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)5.597e-12
Glyma.14G150300 hypothetical protein AT4G08330:AT4G08330:uncharacterized protein 1Chr14:32471354–32474446 (-)6.374e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.006e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.601e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.006e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.006e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)8.185e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)9.65e-14
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)3.536e-12
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)3.536e-12
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)7.46e-11
Glyma.16G057500 hypothetical protein NA 1Chr16:5631176–5634867 (-)4.426e-12
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)5.216e-14
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:5656328–5663040 (-)5.576e-11
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 1Chr16:5685464–5692098 (+)1.08e-11
Glyma.16G063600 hypothetical protein NA 1Chr16:6255512–6260421 (+)4.996e-14
Glyma.16G064100 hypothetical protein NA 1Chr16:6322034–6325343 (-)9.549e-12
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)3.26e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)8.163e-12
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)1.134e-12
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)1.134e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)9.812e-13
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)2.611e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.507e-16
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)7.983e-11
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)8.117e-11
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 1Chr17:10870710–10872285 (+)3.697e-11
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)7.474e-11
Glyma.19G009000 hypothetical protein AT5G14780:FDH:formate dehydrogenase 1Chr19:860974–865476 (+)4.078e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.655e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.655e-11
Glyma.19G040100 hypothetical protein AT3G02460:AT3G02460:Ypt/Rab-GAP domain of gyp1p superfamily protein 1Chr19:5773912–5781906 (-)4.139e-12
Glyma.19G041000 hypothetical protein NA 1Chr19:5964641–5965947 (-)4.139e-12