Overview Annotation GWAS Evidence Associated genes

P12357

Metabolite ID
P12357
Deionized mass
583.2709 Da
Average m/z
584.2821
Average RT
11.0753
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
23
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

23 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G137600 hypothetical protein NA 3Chr16:29468438–29472890 (-)3.367e-22
Glyma.16G137000 hypothetical protein NA 2Chr16:29418205–29421765 (-)9.136e-12
Glyma.16G137100 hypothetical protein NA 2Chr16:29421091–29421534 (+)9.136e-12
Glyma.02G303600 hypothetical protein NA 1Chr02:47883626–47887124 (-)8.094e-11
Glyma.02G303700 hypothetical protein NA 1Chr02:47892900–47896207 (+)8.094e-11
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 1Chr02:47908136–47915999 (-)8.094e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.165e-11
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)8.683e-11
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)8.683e-11
Glyma.07G255200 hypothetical protein AT3G23540:AT3G23540:alpha/beta-Hydrolases superfamily protein__AT4G14290:AT4G14290:alpha/beta-Hydrolases superfamily pr… 1Chr07:43155622–43165663 (+)7.84e-11
Glyma.07G255400 hypothetical protein AT5G19010:MPK16:mitogen-activated protein kinase 16 1Chr07:43173504–43180366 (-)7.84e-11
Glyma.07G255900 hypothetical protein AT3G23600:AT3G23600:alpha/beta-Hydrolases superfamily protein 1Chr07:43214683–43218261 (-)7.84e-11
Glyma.07G256200 hypothetical protein AT3G23580:RNR2A:ribonucleotide reductase 2A 1Chr07:43228132–43232417 (+)7.84e-11
Glyma.07G257300 hypothetical protein AT3G06130:AT3G06130:Heavy metal transport/detoxification superfamily protein__AT5G19090:AT5G19090:Heavy metal transport… 1Chr07:43333980–43336527 (+)7.84e-11
Glyma.14G119800 hypothetical protein AT1G43850:SEU:SEUSS transcriptional co-regulator 1Chr14:16751592–16763348 (-)2.395e-11
Glyma.16G138500 hypothetical protein NA 1Chr16:29564872–29566190 (+)1.642e-13
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)1.771e-21
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)4.086e-15
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.037e-19
Glyma.16G148400 hypothetical protein AT2G45710:AT2G45710:Zinc-binding ribosomal protein family protein 1Chr16:30901868–30903453 (+)4.887e-11
Glyma.18G213300 hypothetical protein AT5G43180:AT5G43180:transmembrane protein, putative (Protein of unknown function, DUF599) 1Chr18:50026808–50028261 (-)5.404e-12
Glyma.18G213400 hypothetical protein NA 1Chr18:50037003–50043647 (+)5.404e-12
Glyma.18G214000 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr18:50088148–50092969 (-)1.17e-13