SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.02G121500

Description hypothetical protein

Gene interval Chr02:12065640–12082937 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features65Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records26

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.9077.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

65 matching features · page 1 of 7

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P00771 Rhodamine 123 344.1198 61.218e-16
P20979 No candidate annotation 129.0453 63.549e-14
P30931 methyl 5S,6S-diacetoxy-9-oxo-10-chloro-12S-hydroxy-10E,14Z-prostadienoate-cyclo[8R,12S] 500.2216 51.586e-13
P32139 Bisavenanthramide B1 656.1716 52.484e-17
P39583 Antibiotic KA 7367B 200.1535 55.302e-12
P39607 Effusanin D 448.2081 51.231e-11
P14858 Mandelonitrile 133.0519 43.502e-15
P17592 No candidate annotation 175.1437 44.828e-14
P25647 Crooksiine 640.2895 43.583e-14
P48001 1-dodecyl-2-acetyl-sn-glycero-3-phosphocholine 467.2965 42.099e-12