Overview Annotation GWAS Evidence Associated genes

P32139

Metabolite ID
P32139
Deionized mass
656.1716 Da
Average m/z
657.1792
Average RT
16.5645
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G121500 hypothetical protein NA 5Chr02:12065640–12082937 (+)2.484e-17
Glyma.17G035600 hypothetical protein NA 2Chr17:2619366–2619935 (+)1.44e-11
Glyma.17G045900 hypothetical protein AT2G03140:AT2G03140:alpha/beta-Hydrolases superfamily protein 2Chr17:3418237–3434166 (-)1.071e-13
Glyma.02G125600 hypothetical protein AT2G14960:GH3.1:Auxin-responsive GH3 family protein 1Chr02:12584740–12587472 (+)1.606e-15
Glyma.02G126400 hypothetical protein NA 1Chr02:12678071–12683492 (+)1.761e-17
Glyma.02G127000 hypothetical protein AT1G13580:LAG13:LAG1 longevity assurance-like protein 1Chr02:12798511–12806795 (+)3.192e-15
Glyma.02G127400 hypothetical protein AT1G26190:AT1G26190:Phosphoribulokinase / Uridine kinase family 1Chr02:12849745–12869066 (+)8.58e-11
Glyma.02G127900 hypothetical protein NA 1Chr02:13028901–13030367 (+)4.71e-12
Glyma.02G131200 hypothetical protein AT3G25640:AT3G25640:MIZU-KUSSEI-like protein (Protein of unknown function, DUF617) 1Chr02:13534843–13536329 (+)2.959e-11
Glyma.07G070900 hypothetical protein AT1G31870:AT1G31870:pre-mRNA-splicing factor of RES complex protein 1Chr07:6443135–6449037 (-)1.83e-11
Glyma.07G071000 hypothetical protein AT4G00480:ATMYC1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr07:6464646–6470484 (+)1.958e-12
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)3.5e-12
Glyma.17G034500 hypothetical protein AT3G17090:AT3G17090:Protein phosphatase 2C family protein 1Chr17:2518522–2522983 (+)4.038e-11
Glyma.17G034700 hypothetical protein NA 1Chr17:2531018–2533313 (+)4.038e-11
Glyma.17G036600 hypothetical protein AT3G06550:RWA2:O-acetyltransferase family protein 1Chr17:2675482–2681443 (+)3.529e-11
Glyma.17G037100 SFR2 beta-glycosidase-like AT3G06510:SFR2:Glycosyl hydrolase superfamily protein 1Chr17:2702083–2707935 (-)3.529e-11
Glyma.17G045800 hypothetical protein AT3G43190:SUS4:sucrose synthase 4__AT5G20830:SUS1:sucrose synthase 1 1Chr17:3404918–3410491 (+)1.071e-13