SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.01G125400

Description hypothetical protein

Gene interval Chr01:43394231–43404097 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features417Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

417 matching features · page 39 of 42

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P48236 N-Palmitoyl Glutamic acid 385.2787 12.577e-12
P48371 Erythrophloin E 324.2139 13.842e-12
P48483 Eutreptiellanone 562.3803 15.601e-11
P49152 o-Methylacetophenone 134.0722 11.365e-11
P49571 Olopatadine n-oxide 353.1566 16.166e-17
P49596 3-O-(Z)-Coumaroyl beta-amyrin 572.4270 11.858e-11
P49761 No candidate annotation 97.5033 12.273e-11
P49933 Senbusine A 423.2591 14.097e-12
P49998 No candidate annotation 174.5608 16.383e-11
P50021 24-Nor-5beta-cholane-3alpha,7alpha,12alpha,23-tetrol 380.2856 18.823e-13