Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P48371

Metabolite ID
P48371
Deionized mass
324.2139 Da
Average m/z
325.2184
Average RT
25.2534
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
49
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

49 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)7.196e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)4.36e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)4.235e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)2.959e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)5.986e-11
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)3.842e-12
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)3.842e-12
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)3.842e-12
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)3.842e-12
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)3.842e-12
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)3.842e-12
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)3.842e-12
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)7.196e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.699e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)6.407e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)8.726e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)8.962e-13
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)2.511e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)8.093e-12
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)5.474e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.645e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)2.867e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)2.867e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)2.867e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)9.893e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)6.677e-11
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)2.066e-11
Glyma.09G019800 VAMP721D vesicle-associated membrane protein 721d NA 1Chr09:1540660–1547761 (+)9.688e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)1.289e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.163e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.926e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.343e-14
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)2.577e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)2.577e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.123e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)5.367e-13
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)1.38e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)1.38e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)1.38e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)4.51e-13
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.172e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)3.151e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)4.545e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)4.235e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)8.648e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)9.571e-13
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)9.571e-13
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)1.807e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)2.289e-11