SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.08G117100

Description hypothetical protein

Gene interval Chr08:9032236–9036159 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G34190:AT2G34190:Xanthine/uracil permease family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features170Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

170 matching features · page 1 of 17

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P00482 HC Blue No.1 255.1197 17.353e-11
P00694 Stealthin C 307.0854 11.26e-11
P00722 No candidate annotation 142.1090 15.482e-11
P01141 3-Methyl-2-thioxoimidazolidin-4-one 130.0199 14.425e-15
P01269 Viburtinal 160.0522 16.586e-12
P01489 3-Hydroxy-2-methylglutaric acid 162.0506 17.289e-13
P01836 2-Hydroxynicotinic acid 139.0257 12.781e-11
P01978 8-Oxo-7,8-dihydrodeoxyguanine 151.0507 17.363e-11
P02277 No candidate annotation 173.9815 13.588e-11
P02554 Hygrocin B 507.1927 15.107e-12