Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P37987

Metabolite ID
P37987
Deionized mass
270.1463 Da
Average m/z
811.4444
Average RT
18.8456
Adduct
[3M+H]+
Association scope
Overlapping genes only
Associated genes
123
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

123 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)5.742e-14
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 4Chr19:1134716–1143232 (+)6.718e-15
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)2.396e-14
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.295e-13
Glyma.02G062600 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 2Chr02:5645621–5648965 (+)6.71e-15
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)9.714e-15
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 2Chr07:9523110–9526319 (+)6.259e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)9.974e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.199e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.199e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 2Chr14:5675792–5680343 (+)1.634e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.045e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)3.608e-15
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)1.501e-15
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)2.396e-14
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)7.084e-12
Glyma.01G021700 hypothetical protein NA 1Chr01:2197811–2200232 (+)7.801e-11
Glyma.01G022000 hypothetical protein NA 1Chr01:2209688–2210849 (-)7.801e-11
Glyma.01G022200 hypothetical protein NA 1Chr01:2212834–2213622 (+)7.801e-11
Glyma.01G022300 hypothetical protein NA 1Chr01:2215383–2217438 (+)8.566e-11
Glyma.02G061700 hypothetical protein AT2G23450:AT2G23450:Protein kinase superfamily protein 1Chr02:5577271–5582873 (-)4.089e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)8.917e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)7.08e-11
Glyma.03G007100 hypothetical protein AT5G17780:AT5G17780:alpha/beta-Hydrolases superfamily protein__AT5G17720:AT5G17720:alpha/beta-Hydrolases superfamily pr… 1Chr03:647777–651152 (-)2.258e-11
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 1Chr03:1875182–1876855 (+)7.168e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)8.933e-15
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.995e-13
Glyma.03G148900 hypothetical protein NA 1Chr03:36449311–36451278 (+)8.535e-11
Glyma.03G149000 hypothetical protein AT2G48010:RKF3:receptor-like kinase in in flowers 3 1Chr03:36454104–36456822 (+)3.26e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.173e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)7.532e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.44e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)3.321e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)3.321e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)3.321e-12
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)1.002e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)2.46e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.456e-17
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.975e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)8.891e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)7.255e-21
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)7.255e-21
Glyma.06G126400 hypothetical protein AT5G53150:AT5G53150:DnaJ heat shock amino-terminal domain protein 1Chr06:10356650–10362151 (-)1.74e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)8.188e-17
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)5.461e-15
Glyma.06G134900 hypothetical protein AT4G27670:HSP21:heat shock protein 21 1Chr06:11083841–11088991 (+)3.967e-11
Glyma.06G136200 hypothetical protein AT5G54170:AT5G54170:Polyketide cyclase/dehydrase and lipid transport superfamily protein 1Chr06:11160066–11162505 (-)6.477e-12
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)3.96e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)3.96e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.079e-11
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)4.64e-12
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)4.64e-12
Glyma.07G078000 hypothetical protein NA 1Chr07:7121636–7126695 (+)2.792e-11
Glyma.07G078300 hypothetical protein NA 1Chr07:7150800–7154478 (-)2.06e-11
Glyma.07G087700 hypothetical protein AT3G24495:MSH7:MUTS homolog 7 1Chr07:8111751–8121053 (+)6.67e-12
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)6.398e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.484e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)6.207e-11
Glyma.09G200300 hypothetical protein NA 1Chr09:42466263–42471449 (+)7.985e-11
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)4.891e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)8.153e-15
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.871e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.871e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.871e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.871e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.398e-11
Glyma.10G257500 hypothetical protein NA 1Chr10:48386988–48389180 (-)1.814e-12
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)9.458e-11
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)1.785e-12
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)1.098e-12
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)1.098e-12
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)1.098e-12
Glyma.11G237700 hypothetical protein NA 1Chr11:33203513–33233708 (-)1.161e-12
Glyma.11G238100 hypothetical protein AT4G39820:AT4G39820:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr11:33261569–33264662 (+)2.308e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)9.974e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)1.307e-11
Glyma.12G228300 hypothetical protein AT3G15030:TCP4:TCP family transcription factor 4 1Chr12:38813527–38816237 (-)7.184e-14
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)7.321e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.295e-13
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)4.317e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)6.812e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)6.812e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.199e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)4.49e-13
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)4.364e-14
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)5.213e-17
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)7.442e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)2.61e-13
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)1.161e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.608e-15
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)1.508e-12
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)4.934e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.495e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.285e-13
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)5.827e-12
Glyma.15G275100 hypothetical protein AT5G42470:AT5G42470:BRCA1-A complex subunit BRE-like protein 1Chr15:51350998–51355557 (-)1.562e-14
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)1.207e-11
Glyma.16G105700 hypothetical protein NA 1Chr16:21404554–21412265 (-)3.485e-11
Glyma.16G105800 hypothetical protein NA 1Chr16:21409016–21412087 (-)3.485e-11
Glyma.16G106200 hypothetical protein NA 1Chr16:21463300–21469532 (+)3.485e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)1.679e-12
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)5.742e-14
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)3.357e-12
Glyma.16G111800 hypothetical protein AT2G17520:IRE1A:Endoribonuclease/protein kinase IRE1-like protein 1Chr16:24720965–24731678 (-)7.745e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.095e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)6.088e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.453e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)5.909e-11
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)4.971e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)6.543e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)6.543e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.29e-11
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)3.24e-11
Glyma.17G205900 hypothetical protein NA 1Chr17:33578345–33582235 (-)9.229e-11
Glyma.17G206000 hypothetical protein NA 1Chr17:33582328–33583013 (-)9.229e-11
Glyma.17G206100 hypothetical protein NA 1Chr17:33612472–33622199 (-)9.229e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)9.418e-15
Glyma.18G238000 hypothetical protein AT1G01490:AT1G01490:Heavy metal transport/detoxification superfamily protein 1Chr18:52679724–52682816 (+)1.018e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)2.377e-13
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 1Chr19:1148510–1149495 (+)7.831e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.671e-16
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.671e-16
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)2.112e-11