SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G200300

Description hypothetical protein

Gene interval Chr09:42466263–42471449 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features48Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

48 matching features · page 1 of 5

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P02996 1,4-Dideoxymannojirimycin 147.0893 12.112e-11
P03071 2-Amino-3,4-dihydroxypentanedioic acid 179.0426 14.83e-14
P03599 Cyclo[(Z)-alpha,beta-didehydrophenylalanyl-L-leucyl] 258.1325 16.311e-11
P03988 No candidate annotation 189.0592 11.345e-12
P04391 Coptisine 319.0855 11.681e-11
P05636 Prenostodione 337.0949 11.071e-11
P06885 Linamarin 247.1032 19.389e-11
P11076 Amino leucine 146.1063 13.089e-11
P12589 N-Desmethyleletriptan 368.1571 14.716e-11
P16043 No candidate annotation 137.0901 17.178e-11