Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P36374

Metabolite ID
P36374
Deionized mass
561.7929 Da
Average m/z
562.7980
Average RT
18.1089
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
119
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

119 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.861e-18
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)2.863e-14
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)3.133e-11
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 2Chr03:1875182–1876855 (+)3.812e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 2Chr06:48170133–48173010 (-)1.479e-11
Glyma.08G122200 hypothetical protein NA 2Chr08:9416766–9429995 (-)7.096e-16
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 2Chr08:9435391–9437279 (+)7.096e-16
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)7.096e-16
Glyma.09G018700 hypothetical protein NA 2Chr09:1470411–1472672 (-)1.02e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.718e-16
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.718e-16
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)3.699e-12
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)6.887e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)1.059e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.861e-18
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)5.41e-11
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)4.409e-12
Glyma.01G154500 hypothetical protein AT1G31780:AT1G31780:oligomeric golgi complex subunit 1Chr01:49196540–49201707 (+)4.776e-13
Glyma.02G121500 hypothetical protein NA 1Chr02:12065640–12082937 (+)7.371e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)3.167e-13
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)7.17e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.307e-14
Glyma.03G136000 hypothetical protein NA 1Chr03:35138670–35188160 (-)1.89e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)2.267e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.447e-16
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)5.934e-16
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)3.21e-12
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)6.834e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.044e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.126e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.559e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.996e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.996e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.996e-12
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 1Chr06:16709212–16710732 (-)2.197e-11
Glyma.06G209300 hypothetical protein NA 1Chr06:20573671–20581076 (-)8.706e-11
Glyma.06G291300 hypothetical protein NA 1Chr06:48016841–48019943 (+)1.122e-14
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)4.469e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)4.469e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)4.469e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)4.987e-12
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)1.291e-12
Glyma.07G019900 hypothetical protein AT1G79870:AT1G79870:D-isomer specific 2-hydroxyacid dehydrogenase family protein 1Chr07:1561952–1564494 (+)3.143e-13
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)4.392e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)6.612e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)3.619e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)3.619e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)8.945e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)7.096e-16
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)5.296e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)7.096e-16
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)7.388e-11
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:20444715–20447665 (-)5.215e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)4.86e-14
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)1.331e-14
Glyma.09G167000 hypothetical protein NA 1Chr09:39103764–39109664 (-)1.847e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)9.608e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)1.38e-12
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)1.471e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)3.278e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.987e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.987e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.987e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.987e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.012e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.829e-13
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)4.959e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.72e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.72e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.72e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.72e-11
Glyma.11G090300 hypothetical protein AT4G19190:AT4G19190:zinc knuckle (CCHC-type) family protein 1Chr11:6849007–6855564 (+)2.278e-13
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.088e-13
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.088e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)4.945e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)5.393e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)5.393e-12
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)9.342e-11
Glyma.12G228000 hypothetical protein AT1G53210:AT1G53210:sodium/calcium exchanger family protein / calcium-binding EF hand family protein 1Chr12:38789187–38797498 (+)6.644e-12
Glyma.12G228300 hypothetical protein AT3G15030:TCP4:TCP family transcription factor 4 1Chr12:38813527–38816237 (-)5.552e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)2.863e-14
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)5.275e-13
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)3.951e-14
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)3.951e-14
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.718e-16
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)3.172e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)3.668e-11
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)1.15e-14
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.699e-12
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)3.093e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.767e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.557e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.767e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.767e-13
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)5.409e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)6.887e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.737e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)3.387e-12
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)1.629e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.54e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.54e-11
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)6.479e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)5.437e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)3.133e-11
Glyma.17G258200 GASA29 gibberellin-regulated protein 29 NA 1Chr17:41222782–41223797 (-)8.772e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)5.99e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.288e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.288e-13
Glyma.19G027700 hypothetical protein AT5G15440:EDL1:EID1-like 1 1Chr19:3471299–3475645 (+)3.494e-11
Glyma.19G031200 hypothetical protein NA 1Chr19:3870532–3874170 (-)5.029e-12
Glyma.19G032500 hypothetical protein NA 1Chr19:4140729–4141955 (-)6.132e-11
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)4.622e-12
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)3.58e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)9.188e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)5.457e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)3.037e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)4.92e-14
Glyma.20G211500 hypothetical protein AT3G63410:APG1:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr20:44820994–44827443 (+)6.606e-11
Glyma.20G217700 hypothetical protein AT1G32810:AT1G32810:RING/FYVE/PHD zinc finger superfamily protein 1Chr20:45347424–45357977 (-)4.996e-11