Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P31028

Metabolite ID
P31028
Deionized mass
706.2127 Da
Average m/z
707.2188
Average RT
16.2051
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
102
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

102 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)3.294e-14
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.201e-11
Glyma.08G183700 Fasciclin-like arabinogalactan protein 19 NA 3Chr08:14738283–14742033 (+)1.108e-13
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)9.352e-13
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)3.696e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)1.375e-14
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)1.375e-14
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 2Chr03:169480–172727 (+)3.672e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)7.18e-12
Glyma.08G184300 hypothetical protein NA 2Chr08:14784345–14786953 (+)2.809e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)2.001e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.805e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.805e-12
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)1.431e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 2Chr16:26057276–26069534 (+)2.487e-15
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)1.628e-17
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)3.294e-14
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)2.532e-12
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)2.912e-11
Glyma.19G033700 hypothetical protein AT3G02320:AT3G02320:N2,N2-dimethylguanosine tRNA methyltransferase__AT5G15810:AT5G15810:tRNA (guanine(26)-N(2))-dimethy… 2Chr19:4332261–4339570 (+)2.566e-12
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)7.475e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)2.318e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.928e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.031e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.786e-15
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.786e-15
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.786e-15
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)5.814e-11
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)5.814e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.201e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.201e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.925e-11
Glyma.07G019900 hypothetical protein AT1G79870:AT1G79870:D-isomer specific 2-hydroxyacid dehydrogenase family protein 1Chr07:1561952–1564494 (+)2.795e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)4.751e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)4.751e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)3.202e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)7.765e-11
Glyma.08G182000 hypothetical protein NA 1Chr08:14601875–14604750 (+)1.954e-11
Glyma.08G182500 hypothetical protein NA 1Chr08:14639429–14643788 (+)9.739e-11
Glyma.08G183800 hypothetical protein NA 1Chr08:14744295–14744525 (+)3.343e-12
Glyma.08G184000 hypothetical protein AT2G01080:AT2G01080:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr08:14749219–14752814 (-)2.886e-11
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:20444715–20447665 (-)3.492e-14
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)2.566e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)2.105e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)6.95e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)9.389e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)1.557e-12
Glyma.11G077300 hypothetical protein AT2G17890:CPK16:calcium-dependent protein kinase 16__AT5G66210:CPK28:calcium-dependent protein kinase 28__AT4G36070:CPK… 1Chr11:5795953–5801540 (+)1.968e-11
Glyma.11G105500 hypothetical protein AT2G16640:TOC132:multimeric translocon complex in the outer envelope membrane 132 1Chr11:8015639–8020644 (-)4.169e-11
Glyma.11G105600 hypothetical protein NA 1Chr11:8021436–8024175 (+)2.206e-11
Glyma.11G110300 hypothetical protein AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… 1Chr11:8402144–8406496 (-)4.243e-12
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)7.639e-12
Glyma.11G182700 hypothetical protein AT1G32250:AT1G32250:Calcium-binding EF-hand family protein 1Chr11:25028353–25031056 (-)1.308e-11
Glyma.11G183200 hypothetical protein AT2G27500:AT2G27500:Glycosyl hydrolase superfamily protein 1Chr11:25070908–25075185 (-)5.482e-11
Glyma.11G183800 hypothetical protein AT5G22450:AT5G22450:spectrin beta chain, brain 1Chr11:25162867–25173439 (-)2.562e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)2.61e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)2.61e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.138e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.138e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)7.645e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.539e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.545e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.545e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)9.352e-13
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)2.349e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.107e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.107e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.805e-12
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)4.617e-12
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)4.617e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.348e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.736e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.349e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.349e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.545e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.689e-16
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)4.04e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)1.431e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)3.696e-12
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)3.696e-12
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)3.696e-12
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)3.696e-12
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)3.108e-13
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)1.734e-12
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)1.375e-14
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)1.375e-14
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.925e-13
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.018e-14
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)8.233e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.252e-13
Glyma.16G180000 hypothetical protein NA 1Chr16:34064572–34069421 (+)3.546e-13
Glyma.16G180100 hypothetical protein NA 1Chr16:34070806–34076053 (+)3.546e-13
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)2.074e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)2.287e-11
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 1Chr17:10870710–10872285 (+)6.855e-12
Glyma.17G137100 hypothetical protein AT4G22860:AT4G22860:Cell cycle regulated microtubule associated protein 1Chr17:11065492–11072635 (+)8.884e-12
Glyma.18G201900 hypothetical protein NA 1Chr18:48192545–48196624 (-)3.435e-11
Glyma.18G204200 hypothetical protein NA 1Chr18:48697660–48700908 (+)2.21e-11
Glyma.19G031200 hypothetical protein NA 1Chr19:3870532–3874170 (-)1.107e-14
Glyma.19G032500 hypothetical protein NA 1Chr19:4140729–4141955 (-)1.226e-14
Glyma.19G032800 hypothetical protein NA 1Chr19:4196959–4199265 (-)4.907e-16
Glyma.19G033800 hypothetical protein AT3G02230:RGP1:reversibly glycosylated polypeptide 1 1Chr19:4352324–4355794 (-)2.567e-12