SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G039900

Description hypothetical protein

Gene interval Chr03:4988423–4991582 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features61Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0164.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

61 matching features · page 1 of 7

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P25270 (6E)-8-Oxogeraniol 168.1138 27.608e-17
P00248 No candidate annotation 666.1576 11.602e-14
P03351 No candidate annotation 212.9694 13.675e-12
P03687 4-Hydroxy-6-methyl-3-(1-oxobutyl)-2H-pyran-2-one 196.0736 14.836e-12
P03698 8-Hydroxy-deoxyguanosine 283.0904 11.384e-11
P03988 No candidate annotation 189.0592 11.496e-11
P06176 Danshenol B 354.1860 11.595e-11
P07852 No candidate annotation 807.8665 19.185e-11
P08385 2'-N-Hydroxynocardicin C 502.1713 17.913e-12
P10739 Antibiotic D 788-7 515.1878 11.993e-11