P16525
Metabolite ID
P16525
Deionized mass
728.1731 Da
Average m/z
729.1824
Average RT
12.3012
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
115
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
Loading GWAS records…
Loading Manhattan plot…
This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
Loading Q–Q plot…
Loading GWAS summary…
Associated genes
115 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.16G111500 | hypothetical protein | AT4G35500:AT4G35500:Protein kinase superfamily protein | 4 | Chr16:24626024–24635513 (+) | 7.037e-17 | |
| Glyma.16G114900 | hypothetical protein | NA | 4 | Chr16:25456379–25485759 (+) | 3.312e-12 | |
| Glyma.16G209300 | hypothetical protein | NA | 4 | Chr16:36856833–36863994 (-) | 7.346e-13 | |
| Glyma.19G027000 | hypothetical protein | NA | 4 | Chr19:3335896–3343744 (+) | 1.037e-15 | |
| Glyma.13G224800 | hypothetical protein | NA | 3 | Chr13:33748627–33756494 (-) | 5.395e-12 | |
| Glyma.15G257100 | hypothetical protein | AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein | 3 | Chr15:48661607–48665946 (-) | 1.836e-13 | |
| Glyma.08G303400 | hypothetical protein | NA | 2 | Chr08:42139097–42147365 (+) | 7.845e-11 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 2 | Chr12:36473422–36498915 (+) | 3.389e-13 | |
| Glyma.14G149300 | hypothetical protein | NA | 2 | Chr14:32235308–32258014 (+) | 9.492e-11 | |
| Glyma.14G201600 | hypothetical protein | NA | 2 | Chr14:46703283–46706500 (+) | 6.729e-12 | |
| Glyma.16G111100 | hypothetical protein | NA | 2 | Chr16:24438458–24444801 (+) | 7.037e-17 | |
| Glyma.16G111800 | hypothetical protein | AT2G17520:IRE1A:Endoribonuclease/protein kinase IRE1-like protein | 2 | Chr16:24720965–24731678 (-) | 3.331e-12 | |
| Glyma.16G208500 | EIF6 | AT3G55620:eIF6A:Translation initiation factor IF6 | 2 | Chr16:36806718–36809299 (+) | 2.32e-12 | |
| Glyma.19G026600 | hypothetical protein | AT4G13700:PAP23:purple acid phosphatase 23 | 2 | Chr19:3303658–3312907 (-) | 1.037e-15 | |
| Glyma.19G029600 | hypothetical protein | NA | 2 | Chr19:3681517–3690884 (-) | 8.207e-11 | |
| Glyma.01G124100 | hypothetical protein | NA | 1 | Chr01:42886229–42892204 (-) | 6.612e-11 | |
| Glyma.02G204700 | hypothetical protein | AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein | 1 | Chr02:38993365–39000790 (+) | 5.257e-12 | |
| Glyma.02G205300 | hypothetical protein | NA | 1 | Chr02:39037472–39038396 (-) | 4.529e-12 | |
| Glyma.03G001500 | B15-3-5 | AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase | 1 | Chr03:169480–172727 (+) | 3.561e-13 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 5.386e-14 | |
| Glyma.04G112200 | hypothetical protein | AT5G51750:SBT1.3:subtilase 1.3 | 1 | Chr04:12562882–12565006 (+) | 2.734e-14 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr05:32014213–32017922 (-) | 2.542e-12 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 2.281e-12 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 2.281e-12 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 1.599e-13 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 3.593e-13 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 3.593e-13 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 3.593e-13 | |
| Glyma.05G224700 | hypothetical protein | NA | 1 | Chr05:40351005–40361888 (+) | 2.366e-12 | |
| Glyma.05G226000 | hypothetical protein | AT5G19730:AT5G19730:Pectin lyase-like superfamily protein | 1 | Chr05:40458098–40461736 (+) | 3.185e-12 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 9.094e-17 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 5.503e-20 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 8.195e-16 | |
| Glyma.06G112300 | hypothetical protein | AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase | 1 | Chr06:9113982–9118848 (-) | 1.506e-12 | |
| Glyma.06G112600 | hypothetical protein | AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 1 | Chr06:9134358–9144986 (+) | 1.506e-12 | |
| Glyma.06G112700 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr06:9156973–9158659 (+) | 1.506e-12 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 1.531e-11 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 1.531e-11 | |
| Glyma.06G126900 | hypothetical protein | AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) | 1 | Chr06:10403126–10408307 (-) | 1.442e-12 | |
| Glyma.06G190300 | hypothetical protein | AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) | 1 | Chr06:16709212–16710732 (-) | 7.547e-12 | |
| Glyma.07G017600 | hypothetical protein | NA | 1 | Chr07:1415837–1422680 (+) | 2.052e-11 | |
| Glyma.08G016700 | hypothetical protein | AT1G63840:AT1G63840:RING/U-box superfamily protein | 1 | Chr08:1330226–1331366 (-) | 9.606e-11 | |
| Glyma.08G139300 | hypothetical protein | AT2G22125:CSI1:binding protein | 1 | Chr08:10653279–10664544 (-) | 1.576e-12 | |
| Glyma.08G202000 | hypothetical protein | AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | 1 | Chr08:16375907–16384294 (-) | 9.416e-11 | |
| Glyma.09G016500 | hypothetical protein | NA | 1 | Chr09:1274652–1276853 (-) | 3.222e-11 | |
| Glyma.09G016800 | hypothetical protein | NA | 1 | Chr09:1300913–1311894 (+) | 4.251e-11 | |
| Glyma.09G052700 | hypothetical protein | AT1G31120:KUP10:K+ uptake permease 10 | 1 | Chr09:4617652–4626364 (+) | 1.506e-11 | |
| Glyma.09G080200 | hypothetical protein | NA | 1 | Chr09:9256042–9263239 (-) | 9.654e-12 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 3.023e-11 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 1.183e-13 | |
| Glyma.09G249500 | hypothetical protein | NA | 1 | Chr09:47056885–47062577 (+) | 7.686e-11 | |
| Glyma.09G270500 | hypothetical protein | AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent | 1 | Chr09:48745649–48751140 (+) | 6.011e-12 | |
| Glyma.10G078700 | hypothetical protein | NA | 1 | Chr10:8882318–8903950 (+) | 1.81e-12 | |
| Glyma.10G079100 | hypothetical protein | NA | 1 | Chr10:8960669–8962364 (-) | 1.81e-12 | |
| Glyma.10G079800 | hypothetical protein | NA | 1 | Chr10:9223520–9228511 (-) | 1.81e-12 | |
| Glyma.10G080000 | hypothetical protein | AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… | 1 | Chr10:9258476–9260697 (-) | 1.81e-12 | |
| Glyma.10G081200 | hypothetical protein | NA | 1 | Chr10:9600771–9603988 (-) | 1.568e-12 | |
| Glyma.10G081700 | hypothetical protein | NA | 1 | Chr10:9752508–9758422 (+) | 8.916e-13 | |
| Glyma.11G182600 | hypothetical protein | AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein | 1 | Chr11:24998933–25003549 (-) | 1.934e-11 | |
| Glyma.11G182700 | hypothetical protein | AT1G32250:AT1G32250:Calcium-binding EF-hand family protein | 1 | Chr11:25028353–25031056 (-) | 3.711e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 1.254e-13 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 1.254e-13 | |
| Glyma.12G198700 | hypothetical protein | AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein | 1 | Chr12:36001658–36004086 (+) | 8.823e-14 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 5.93e-11 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 3.389e-13 | |
| Glyma.12G204600 | hypothetical protein | AT4G28310:AT4G28310:microtubule-associated protein | 1 | Chr12:36504234–36505245 (+) | 2.825e-11 | |
| Glyma.13G095000 | hypothetical protein | NA | 1 | Chr13:21005327–21006774 (-) | 8.187e-14 | |
| Glyma.13G203200 | hypothetical protein | AT3G52105:AT3G52105:DIS3-exonuclease-like protein | 1 | Chr13:31720004–31725252 (+) | 1.235e-13 | |
| Glyma.13G203300 | hypothetical protein | AT3G63530:BB:RING/U-box superfamily protein | 1 | Chr13:31727841–31735910 (-) | 1.235e-13 | |
| Glyma.13G203700 | hypothetical protein | NA | 1 | Chr13:31780982–31784218 (+) | 1.235e-13 | |
| Glyma.13G203900 | hypothetical protein | NA | 1 | Chr13:31793697–31796601 (-) | 4.602e-14 | |
| Glyma.13G224300 | hypothetical protein | NA | 1 | Chr13:33703380–33715996 (-) | 1.141e-11 | |
| Glyma.13G224500 | hypothetical protein | AT1G29750:RKF1:receptor-like kinase in flowers 1 | 1 | Chr13:33725180–33735368 (+) | 5.395e-12 | |
| Glyma.14G068100 | hypothetical protein | AT3G12550:FDM3:XH/XS domain-containing protein | 1 | Chr14:5701618–5711043 (-) | 4.199e-11 | |
| Glyma.14G068500 | hypothetical protein | NA | 1 | Chr14:5741909–5745574 (-) | 2.136e-12 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 7.934e-14 | |
| Glyma.14G071600 | hypothetical protein | AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein | 1 | Chr14:6016839–6019954 (+) | 6.717e-11 | |
| Glyma.14G094900 | hypothetical protein | AT1G60960:IRT3:iron regulated transporter 3 | 1 | Chr14:8824846–8827258 (-) | 7.42e-12 | |
| Glyma.14G148800 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr14:32154755–32157298 (+) | 9.492e-11 | |
| Glyma.14G201700 | hypothetical protein | NA | 1 | Chr14:46711634–46715644 (-) | 6.729e-12 | |
| Glyma.15G035600 | hypothetical protein | AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III | 1 | Chr15:2830678–2835534 (+) | 9.156e-12 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 6.671e-11 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 9.077e-11 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 6.671e-11 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 6.671e-11 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 8.274e-11 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 2.832e-14 | |
| Glyma.15G257800 | hypothetical protein | NA | 1 | Chr15:48777878–48788726 (-) | 2.733e-11 | |
| Glyma.16G057700 | hypothetical protein | AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr16:5656328–5663040 (-) | 7.143e-11 | |
| Glyma.16G069300 | hypothetical protein | AT3G01600:NAC044:NAC domain containing protein 44 | 1 | Chr16:6914905–6920531 (+) | 4.81e-11 | |
| Glyma.16G105400 | hypothetical protein | AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein | 1 | Chr16:21357465–21364357 (-) | 1.778e-13 | |
| Glyma.16G106300 | hypothetical protein | AT5G23900:AT5G23900:Ribosomal protein L13e family protein | 1 | Chr16:21495147–21497932 (+) | 2.704e-11 | |
| Glyma.16G111200 | hypothetical protein | AT5G65930:ZWI:kinesin-like calmodulin-binding protein (ZWICHEL) | 1 | Chr16:24455709–24466236 (+) | 5.468e-12 | |
| Glyma.16G111400 | hypothetical protein | AT4G35510:AT4G35510:PHD finger-like protein | 1 | Chr16:24546422–24549336 (+) | 4.338e-15 | |
| Glyma.16G112800 | hypothetical protein | AT1G30590:AT1G30590:RNA polymerase I specific transcription initiation factor RRN3 protein__AT2G34750:AT2G34750:RNA pol… | 1 | Chr16:25033921–25041652 (+) | 8.66e-12 | |
| Glyma.16G112900 | hypothetical protein | AT5G65950:AT5G65950:trafficking protein particle complex subunit-like protein | 1 | Chr16:25064625–25072914 (-) | 8.66e-12 | |
| Glyma.16G115300 | hypothetical protein | NA | 1 | Chr16:25584135–25585667 (+) | 3.312e-12 | |
| Glyma.16G115400 | hypothetical protein | NA | 1 | Chr16:25604547–25606360 (+) | 3.312e-12 | |
| Glyma.16G115500 | hypothetical protein | NA | 1 | Chr16:25622503–25630816 (+) | 3.312e-12 | |
| Glyma.16G115600 | hypothetical protein | AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr16:25661245–25664376 (-) | 3.312e-12 | |
| Glyma.16G115800 | hypothetical protein | NA | 1 | Chr16:25719040–25728740 (-) | 7.026e-11 | |
| Glyma.16G117400 | hypothetical protein | NA | 1 | Chr16:26234552–26238233 (-) | 3.368e-13 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 1 | Chr16:26324650–26336836 (+) | 1.749e-14 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 7.998e-15 | |
| Glyma.16G139500 | hypothetical protein | AT5G66550:AT5G66550:Maf-like protein | 1 | Chr16:29686243–29690410 (-) | 9.302e-13 | |
| Glyma.16G189100 | hypothetical protein | AT1G05190:emb2394:Ribosomal protein L6 family | 1 | Chr16:35170253–35173950 (-) | 5.013e-12 | |
| Glyma.17G007700 | hypothetical protein | NA | 1 | Chr17:653891–655878 (+) | 4.316e-11 | |
| Glyma.18G112600 | hypothetical protein | NA | 1 | Chr18:13398219–13405422 (+) | 4.459e-12 | |
| Glyma.18G266500 | hypothetical protein | NA | 1 | Chr18:55088284–55091427 (-) | 2.433e-14 | |
| Glyma.19G009400 | hypothetical protein | AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein | 1 | Chr19:885045–893253 (+) | 3.646e-11 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 1.049e-11 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 1.049e-11 | |
| Glyma.20G107200 | hypothetical protein | AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein | 1 | Chr20:34984922–34988496 (+) | 1.634e-13 | |
| Glyma.20G112600 | hypothetical protein | AT5G04310:AT5G04310:Pectin lyase-like superfamily protein | 1 | Chr20:35468911–35474203 (+) | 9.005e-12 | |
| Glyma.20G112900 | hypothetical protein | AT2G39210:AT2G39210:Major facilitator superfamily protein | 1 | Chr20:35498179–35500565 (-) | 8.579e-11 |