Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P10799

Metabolite ID
P10799
Deionized mass
757.2029 Da
Average m/z
758.2161
Average RT
10.5706
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
68
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

68 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G096100 hypothetical protein AT1G58230:AT1G58230:binding protein 14Chr04:8566631–8625328 (+)2.591e-11
Glyma.04G096800 hypothetical protein AT4G24460:CLT2:CRT (chloroquine-resistance transporter)-like transporter 2 6Chr04:8747857–8778229 (-)1.292e-12
Glyma.04G064500 hypothetical protein NA 3Chr04:5367346–5372857 (+)3.258e-12
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)4.751e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.759e-12
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)8.913e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 2Chr02:7553127–7557516 (-)6.37e-18
Glyma.04G096300 hypothetical protein NA 2Chr04:8635554–8654734 (+)3.668e-12
Glyma.04G096500 hypothetical protein NA 2Chr04:8664088–8675605 (+)1.292e-12
Glyma.04G096600 hypothetical protein AT1G58250:SAB:HYPERSENSITIVE TO PI STARVATION 4 2Chr04:8693806–8724007 (-)1.292e-12
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)1.27e-13
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)9.16e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.024e-12
Glyma.04G064300 Tyrosyl-DNA phosphodiesterase 1 AT5G15170:TDP1:tyrosyl-DNA phosphodiesterase-like protein 1Chr04:5351566–5357225 (+)1.048e-11
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)3.398e-11
Glyma.04G096200 hypothetical protein AT4G24470:ZIM:GATA-type zinc finger protein with TIFY domain-containing protein 1Chr04:8627546–8632713 (+)2.591e-11
Glyma.04G096900 hypothetical protein NA 1Chr04:8778953–8796458 (-)1.292e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)6.93e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)6.93e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)6.93e-12
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)4.593e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.01e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.768e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.462e-15
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.712e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.712e-13
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)6.302e-13
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)3.109e-12
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)6.305e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)6.305e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)8.021e-12
Glyma.07G097000 hypothetical protein AT1G19670:CLH1:chlorophyllase 1 1Chr07:9118318–9120182 (-)9.956e-11
Glyma.09G068800 hypothetical protein AT5G35560:AT5G35560:DENN (AEX-3) domain-containing protein 1Chr09:6979166–6993110 (-)7.237e-13
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)5.939e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)7.689e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)6.468e-14
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)1.624e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)6.317e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.712e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)5.323e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)5.323e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.654e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)2.583e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.759e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)1.9e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)4.965e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.711e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.542e-14
Glyma.15G139000 hypothetical protein NA 1Chr15:11314329–11317181 (-)3.063e-11
Glyma.15G140400 hypothetical protein NA 1Chr15:11495189–11495691 (+)4.242e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)7.34e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)9.025e-13
Glyma.16G062500 hypothetical protein NA 1Chr16:6099546–6105267 (-)3.194e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)3.888e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.609e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)5.045e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)3.988e-12
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)8.913e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)2.436e-11
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)2.119e-11
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)2.436e-11
Glyma.18G100200 hypothetical protein NA 1Chr18:10512806–10522231 (+)2.436e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)3.483e-12
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)2.967e-12
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)2.017e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)3.563e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)3.083e-11
Glyma.20G179600 hypothetical protein AT2G39220:PLP6:PATATIN-like protein 6__AT3G54950:pPLAIIIbeta:patatin-like protein 6 1Chr20:41714740–41719977 (-)1.859e-11