Overview Annotation GWAS Evidence Associated genes

P10107

Metabolite ID
P10107
Deionized mass
507.1872 Da
Average m/z
508.1911
Average RT
10.3584
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
146
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

146 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)3.204e-12
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)5.75e-11
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)1.404e-16
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)3.139e-16
Glyma.08G147300 hypothetical protein NA 2Chr08:11238871–11242682 (+)6.244e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)7.323e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)2.402e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)1.772e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.032e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)9.737e-12
Glyma.16G121500 hypothetical protein NA 2Chr16:27007186–27010856 (+)8.708e-14
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 2Chr16:34364037–34367765 (-)4.301e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)5.687e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)8.358e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)3.204e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)3.801e-11
Glyma.20G120200 hypothetical protein NA 2Chr20:36268998–36282456 (-)8.252e-12
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)2.71e-12
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)8.83e-14
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.081e-12
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)2.934e-14
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.936e-17
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)6.117e-17
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)9.874e-18
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)9.874e-18
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)9.874e-18
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)9.874e-18
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)9.874e-18
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)9.874e-18
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)9.874e-18
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)1.404e-16
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… 1Chr01:43890586–43892006 (+)1.797e-14
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)9.563e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)9.563e-11
Glyma.02G176800 hypothetical protein AT5G06839:TGA10:bZIP transcription factor family protein 1Chr02:29019977–29028838 (-)9.439e-12
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)3.155e-12
Glyma.03G022900 hypothetical protein NA 1Chr03:2409690–2420328 (-)8.32e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.076e-14
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)2.271e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)5.952e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.282e-11
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 1Chr05:31926976–31929133 (+)8.575e-11
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)2.086e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)9.994e-13
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)9.152e-13
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)9.152e-13
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)8.468e-14
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.782e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.782e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.782e-13
Glyma.05G219800 TRE1 trehalase 1 AT4G24040:TRE1:trehalase 1 1Chr05:39920183–39925215 (+)9.2e-11
Glyma.05G220100 hypothetical protein AT1G33170:AT1G33170:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:39950499–39956022 (+)9.2e-11
Glyma.05G230200 hypothetical protein NA 1Chr05:40815058–40819434 (+)5.656e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)3.65e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.519e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.56e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.887e-14
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 1Chr06:6273644–6283819 (+)7.11e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)3.955e-14
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)3.955e-14
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)3.955e-14
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)8.682e-18
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)8.682e-18
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)7.213e-13
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.493e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)1.261e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)9.988e-14
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)9.988e-14
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)1.018e-14
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.154e-14
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.221e-11
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)2.221e-11
Glyma.08G146100 hypothetical protein NA 1Chr08:11119305–11124078 (+)4.474e-11
Glyma.08G147200 hypothetical protein AT3G18710:PUB29:plant U-box 29__AT5G64660:CMPG2:CYS, MET, PRO, and GLY protein 2 1Chr08:11225587–11227445 (+)1.28e-14
Glyma.08G147400 hypothetical protein AT1G48870:AT1G48870:Transducin/WD40 repeat-like superfamily protein 1Chr08:11248804–11251957 (+)2.704e-12
Glyma.08G149500 hypothetical protein NA 1Chr08:11460264–11465243 (-)6.644e-11
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)9.315e-11
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)4.902e-14
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)4.902e-14
Glyma.08G330600 hypothetical protein NA 1Chr08:44828516–44836550 (-)5.502e-12
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)5.458e-11
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 1Chr09:5173554–5193820 (-)1.629e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)7.902e-11
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)2.054e-15
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)1.579e-14
Glyma.09G060600 hypothetical protein AT3G28430:AT3G28430:CLEC16A-like protein 1Chr09:5661672–5675338 (-)9.308e-12
Glyma.09G075500 hypothetical protein NA 1Chr09:8234794–8241097 (+)3.088e-11
Glyma.09G075600 hypothetical protein AT1G34630:AT1G34630:uncharacterized protein 1Chr09:8255346–8260648 (-)3.088e-11
Glyma.09G078300 hypothetical protein AT4G29400:AT4G29400:oxidoreductase/transition metal ion-binding protein (DUF3531) 1Chr09:8708840–8718819 (-)3.088e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)6.364e-14
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.71e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.011e-13
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)1.138e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)6.742e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)6.742e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)6.742e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)6.742e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)5.141e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.249e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)4.742e-12
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)4.742e-12
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)4.742e-12
Glyma.12G095500 hypothetical protein AT3G44150:AT3G44150:Expp1 protein 1Chr12:8023570–8027770 (-)3.687e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)8.809e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)8.809e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)8.07e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.402e-12
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)1.036e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)6.135e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.772e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.171e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)1.171e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)1.171e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)2.563e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)1.6e-15
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)1.6e-15
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)1.6e-15
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)2.395e-16
Glyma.13G204200 hypothetical protein NA 1Chr13:31822330–31826011 (+)9.348e-13
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)6.103e-12
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)3.035e-13
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)7.09e-13
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.032e-13
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.66e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)4.816e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.66e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.66e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.247e-13
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)9.464e-12
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)5.75e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)5.75e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.137e-11
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)7.855e-11
Glyma.16G121400 hypothetical protein NA 1Chr16:26989007–26992349 (+)1.87e-12
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)3.931e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.404e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)3.068e-13
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.442e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.442e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)7.668e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)6.285e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)6.51e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.008e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.008e-13
Glyma.19G188200 hypothetical protein NA 1Chr19:44647446–44649620 (-)7.347e-11
Glyma.20G211500 hypothetical protein AT3G63410:APG1:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr20:44820994–44827443 (+)2.611e-11