SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G095500

Description hypothetical protein

Gene interval Chr12:8023570–8027770 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G44150:AT3G44150:Expp1 protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features57Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

57 matching features · page 1 of 6

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P01812 N,N-Dihydroxy-L-tyrosine 213.0620 12.852e-11
P02098 No candidate annotation 206.9592 13.02e-11
P04038 No candidate annotation 273.6501 19.231e-11
P04550 2-(3-Mercaptopropyl)pentanedioic acid 206.0604 11.691e-12
P04739 Succinylproline 215.0780 13.802e-13
P05365 Histidyltryptophan 341.1529 13.553e-11
P05490 1-O-Galloylglycerol 244.0573 18.614e-11
P06345 Rigidiusculamide A 251.1169 12.935e-11
P08252 Arginylisoleucine 287.1927 11.183e-11
P08268 No candidate annotation 264.6586 17.266e-11