SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.19G119200

Description hypothetical protein

Gene interval Chr19:37677773–37683394 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G03630:CS26:cysteine synthase 26

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features221Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records9

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0407.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

221 matching features · page 3 of 23

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P01489 3-Hydroxy-2-methylglutaric acid 162.0506 11.465e-12
P01619 4-Methylumbelliferone 176.0481 13.668e-13
P02052 2-Amino-2-methylpropanoate 103.0623 15.104e-13
P02548 No candidate annotation 185.9469 11.321e-13
P03155 (Z)-1-(Methylthio)-5-phenyl-1-penten-3-yne 188.0664 12.324e-11
P03377 No candidate annotation 214.0940 12.108e-11
P03717 1,2-Dimethoxy-13-methyl-[1,3]benzodioxolo[5,6-c]phenanthridine 347.1150 11.789e-11
P03825 1,2-(dioctanoyl)-sn-glycero-3-phospho-(1'- myo-inositol-4',5'-bisphosphate) 746.2092 12.751e-11
P04048 4-Nitroquinoline N-oxide 190.0393 13.529e-11
P04170 Allithiamine 354.1180 12.982e-12