SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Gene Associated metabolites Research resources

GENE DETAIL · Glycine max

Glyma.19G011800

Description hypothetical protein

Gene interval Chr19:1134716–1143232 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G01420:DOX1:Peroxidase superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

Explore research resources ↓

Associated metabolite features1529Overlap

Maximum supporting SNP records4

Features with ≥2 supporting SNP records1315

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.6481.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

SoyBase ↗Gene models and soybean annotations
NCBI Gene ↗Gene records, sequences and cross-references
UniProt ↗Protein function, domains and annotation evidence
PubMed ↗Publications mentioning this identifier

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

AT3G01420NCBI Gene ↗UniProt ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1529 matching features · page 131 of 153

Metabolite ID	Candidate annotation	Deionized mass (Da)	Supporting SNP records	Minimum P
P52659	Pyroglutamyl-glutamyl-proline amide	354.1541	2	1.959e-11
P52842	Talatisamine	421.2781	2	8.287e-11
P52922	Malachite green	328.1969	2	9.54e-12
P53163	10-hydroxyoctadeca-9Z,12Z-dienoic acid	296.2323	2	9.288e-11
P53245	No candidate annotation	258.8909	2	1.764e-11
P53546	No candidate annotation	123.1108	2	2.646e-11
P53549	No candidate annotation	398.0436	2	7.012e-11
P53741	11-Methoxy-vinorine	364.1754	2	2.277e-11
P54280	Brachycerine	546.2208	2	5.856e-11
P54535	(R)-6-(3-Methylpiperazin-1-yl)nicotinonitrile	202.1223	2	2.868e-12