Overview Annotation GWAS Evidence Associated genes

P53163

Metabolite ID
P53163
Deionized mass
296.2323 Da
Average m/z
297.2397
Average RT
29.7240
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
28
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

28 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)8.84e-11
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)1.327e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)9.288e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.294e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.294e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.061e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.794e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)4.932e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)4.039e-12
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)4.039e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.088e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.73e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.096e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)9.193e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)5.172e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.421e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.421e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)7.256e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)6.776e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.358e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)8.411e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)7.21e-12
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)7.627e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)8.841e-11
Glyma.18G027300 hypothetical protein NA 1Chr18:2049280–2053959 (-)2.536e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)8.33e-13
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)7.935e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)4.134e-15