Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P53741

Metabolite ID
P53741
Deionized mass
364.1754 Da
Average m/z
365.1841
Average RT
30.3011
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
55
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

55 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G090600 hypothetical protein AT3G20290:EHD1:EPS15 homology domain 1 4Chr18:8991445–9001857 (-)1.977e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.374e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.374e-14
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 2Chr14:5675792–5680343 (+)1.456e-14
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)2.277e-11
Glyma.01G022300 hypothetical protein NA 1Chr01:2215383–2217438 (+)8.149e-11
Glyma.01G175500 hypothetical protein AT3G50660:DWF4:Cytochrome P450 superfamily protein 1Chr01:51219681–51224948 (+)5.192e-11
Glyma.02G081900 hypothetical protein AT1G43650:UMAMIT22:nodulin MtN21 /EamA-like transporter family protein 1Chr02:7075646–7080163 (-)5.674e-11
Glyma.03G020800 hypothetical protein AT3G61050:NTMC2T4:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr03:2124895–2135692 (-)2.904e-12
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)5.816e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)9.331e-13
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)8.331e-12
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)2.355e-13
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)2.355e-13
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)2.355e-13
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)3.619e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)6.333e-15
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)6.333e-15
Glyma.06G126300 hypothetical protein NA 1Chr06:10331312–10341252 (-)2.234e-11
Glyma.06G126400 hypothetical protein AT5G53150:AT5G53150:DnaJ heat shock amino-terminal domain protein 1Chr06:10356650–10362151 (-)1.392e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)1.703e-17
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.987e-14
Glyma.06G129400 hypothetical protein AT5G24300:SS1:Glycogen/starch synthases, ADP-glucose type 1Chr06:10632042–10640023 (+)9.214e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)4.472e-12
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr06:49420013–49426780 (-)3.771e-11
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)1.375e-11
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)1.375e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)5.334e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.711e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.934e-14
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)2.038e-13
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)5.714e-11
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)7.729e-12
Glyma.10G266400 hypothetical protein NA 1Chr10:48984735–48993690 (+)6.293e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.121e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.121e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.374e-14
Glyma.13G185400 hypothetical protein NA 1Chr13:29936606–29937420 (+)2.402e-12
Glyma.14G013500 hypothetical protein AT4G25434:NUDT10:nudix hydrolase homolog 10 1Chr14:1009519–1014238 (+)6.321e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)9.821e-15
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)1.778e-13
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)9.809e-13
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)9.458e-12
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 1Chr14:6486139–6488935 (+)1.725e-11
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 1Chr14:6498564–6506068 (+)1.724e-11
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 1Chr14:6508609–6520744 (-)1.725e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.341e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)9.838e-16
Glyma.18G090700 hypothetical protein NA 1Chr18:9016075–9018183 (+)1.977e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)7.516e-11
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)6.269e-11
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)7.516e-11
Glyma.18G100200 hypothetical protein NA 1Chr18:10512806–10522231 (+)7.516e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)5.595e-11
Glyma.20G211500 hypothetical protein AT3G63410:APG1:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr20:44820994–44827443 (+)2.179e-11