SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.19G011700

Description hypothetical protein

Gene interval Chr19:1123637–1130946 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G01420:DOX1:Peroxidase superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1671Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records773

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4626.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1671 matching features · page 65 of 168

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P41611 No candidate annotation 985.5068 21.163e-14
P41628 Cortolone-3-glucuronide 542.2743 21.383e-11
P41635 CDP-DG(22:6(4Z,7Z,10Z,12E,16Z,19Z)-OH(14)/i-19:0) 1083.5609 26.749e-19
P41800 Phlegmariurine C 520.3342 21.267e-15
P41898 No candidate annotation 546.7256 29.494e-12
P41900 Sinuolatin A 396.2153 22.267e-14
P41917 TMC 2A 570.2358 22.295e-13
P42224 Leucyl-Glycine 188.1140 26.913e-12
P42351 Pulicanol 312.1939 26.604e-12
P42362 Pinocembrin 7-O-neohesperidoside 3'''-O-acetate 606.1878 24.938e-12