SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.18G263900

Description hypothetical protein

Gene interval Chr18:54907058–54912936 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features887Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

887 matching features · page 87 of 89

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P52902 Tyrosyl-Gamma-glutamate 309.1304 11.195e-11
P52965 No candidate annotation 254.2379 17.705e-13
P53033 7-Oxononane-1,1,9-tricarbaldehyde 226.1222 11.018e-11
P53048 No candidate annotation 229.8944 19.703e-12
P53258 No candidate annotation 362.6055 13.551e-11
P53406 No candidate annotation 417.0547 14.664e-12
P53480 Bengamide F 372.2267 14.829e-12
P53565 1-O-Isopentyl-3-O-octadec-2-enoyl glycerol 426.3679 12.07e-12
P53804 (5Z,7E,22E,24E,24bE)-(1S,3R)-26,27-dimethyl-24a,24b,24c-trihomo-9,10-seco-5,7,10(19),22,24,24b-cholestahexaene-1,3,25-triol 480.3557 11.885e-11
P54029 Azimexon 194.1183 11.833e-11