Overview Annotation GWAS Evidence Associated genes

P53565

Metabolite ID
P53565
Deionized mass
426.3679 Da
Average m/z
427.3749
Average RT
30.0601
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
20
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

20 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)4.927e-13
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)3.006e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.254e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)7.291e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)7.291e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)7.291e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)9.542e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)3.553e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.006e-13
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)3.024e-12
Glyma.14G202400 hypothetical protein AT1G21480:AT1G21480:Exostosin family protein 1Chr14:46768802–46772377 (+)5.961e-11
Glyma.14G202500 hypothetical protein NA 1Chr14:46773824–46775761 (+)5.961e-11
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)1.754e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)2.319e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)6.736e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.907e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)6.357e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)6.357e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)2.07e-12
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)5.148e-11