SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.18G259000

Description hypothetical protein

Gene interval Chr18:54442402–54446789 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features116Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records24

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.2069.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

116 matching features · page 7 of 12

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P25946 N-Methyl-N-nitroso-1H-purin-6-amine 178.0610 16.583e-11
P26326 No candidate annotation 277.6307 13.676e-11
P26554 L-Alanyl-L-glutamate 218.0912 11.466e-11
P27241 Oxostephabenine 493.1720 19.634e-11
P27823 No candidate annotation 796.2611 12.859e-11
P28722 3-tridecylphenol 276.2419 18.016e-11
P29582 Rhopaladin D 354.1147 11.383e-11
P29604 No candidate annotation 332.6347 13.645e-11
P30039 Tigloylseneganolide A 550.2618 12.09e-11
P30908 Pyrimido[5,4-d]pyrimidine 132.0437 17.175e-11