SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.17G258400

Description hypothetical protein

Gene interval Chr17:41248979–41254225 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G30755:AT1G30755:elongation factor G, putative (DUF668)

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features416Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

416 matching features · page 31 of 42

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P39439 LysoPE(0:0/18:3(9Z,12Z,15Z)) 475.2666 11.122e-11
P39857 (Tetrahydropyran-4-yl)-[2-phenyl-5-(1,1-dioxo-thiomorpholin-4-yl)methyl-1H-indol-7-yl]amine 439.1950 13.761e-11
P40300 Dibutylphthalic acid 278.1507 13.331e-11
P40346 No candidate annotation 570.1408 12.431e-11
P40362 BL V 424.0812 11.524e-13
P40376 Bombesin analogue 1016.5499 17.132e-11
P41019 IKK Inhibitor VII 483.2144 17.04e-12
P41207 Volasertib 618.4025 12.209e-11
P41280 No candidate annotation 425.6856 14.095e-11
P41491 No candidate annotation 677.8221 16.371e-11