SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.17G217900

Description hypothetical protein

Gene interval Chr17:36771760–36778616 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features284Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records258

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.9542.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

284 matching features · page 5 of 29

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P01926 Hyacinthacine A4 187.1208 38.795e-12
P01944 Pseudouridine 244.0707 32.918e-11
P02020 Castamolline 267.0723 31.985e-11
P02515 2,5-Dimethyl-3-furanthiol acetate 170.0374 34.078e-12
P02658 5,7,3',4',5'-Pentahydroxyflavanone 304.0541 32.925e-11
P03198 Lansoprazole 369.0746 33.898e-13
P03606 N-(gamma-Glutamyl)ethanolamine 190.0927 37.015e-12
P03735 Aclidinomycin A 415.1744 36.78e-12
P03884 (2R,3R,4S,5R)-2-(Hydroxymethyl)-6-[(3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxane-3,4,5-triol 326.1201 31.708e-12
P04032 Methyl 6-methyl-3-(2-methylpropyl)-4-(3-nitrophenyl)-4,7-dihydrothieno[2,3-b]pyridine-5-carboxylate 386.1272 31.686e-11