SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.17G216700

Description hypothetical protein

Gene interval Chr17:36510062–36519347 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features783Overlap
Maximum supporting SNP records3
Features with ≥2 supporting SNP records783

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

783 matching features · page 76 of 79

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P49218 Embutramide 293.2045 25.047e-12
P49263 Curacin A 373.2436 25.731e-13
P49351 3,16'-Dihydroxy-beta,chi-caroten-4-one 578.3786 29.636e-12
P49524 N(6)-Monobutyryladenosine 337.1384 21.566e-12
P49541 2'-O-(alpha-D-Manp)-6'-O-(alpha-D-Manp)-(1-octadecanoyl-sn-glycero-3-phospho-1'-myo-inositol) 924.4315 21.227e-13
P50043 2,5-Dimethylfuran 96.0579 22.101e-11
P50045 No candidate annotation 238.1769 24.217e-12
P50078 Dinofenate 450.0619 25.097e-12
P50201 Dictyopterene C' 150.1395 21.923e-11
P50354 Nodulisporic acid C2 701.4348 28.487e-11