SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.17G121800

Description hypothetical protein

Gene interval Chr17:9746590–9748712 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features545Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

545 matching features · page 53 of 55

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P52922 Malachite green 328.1969 13.467e-12
P52925 No candidate annotation 88.4990 17.684e-15
P53119 Silafluofen 408.1913 11.035e-12
P53176 No candidate annotation 258.8967 15.924e-11
P53382 Silafluofen 408.1910 18.952e-11
P53413 Tetradecyl nicotinate 319.2477 17.081e-12
P53884 Orthosiphol J 612.2585 19.444e-11
P54063 (2E,4E)-Pentadeca-2,4-dienoylcarnitine 381.2860 11.017e-11
P54095 4-methylene-5alpha-poriferast-7,9(11),14-trien-3beta-ol 422.3491 14.428e-14
P54509 n2-Acetyl,n6-methyllysine 202.1324 11.593e-12