Overview Annotation GWAS Evidence Associated genes

P53382

Metabolite ID
P53382
Deionized mass
408.1910 Da
Average m/z
409.1995
Average RT
29.9693
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
20
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

20 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)5.319e-11
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)3.54e-11
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)2.361e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)4.774e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)4.774e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)4.774e-11
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 1Chr08:11525692–11536927 (+)2.127e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)8.49e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)1.48e-11
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)4.607e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)9.278e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)9.278e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)7.124e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.422e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)4.753e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.422e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.422e-12
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)3.54e-11
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)8.952e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)6.83e-11