SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.17G121800

Description hypothetical protein

Gene interval Chr17:9746590–9748712 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features545Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

545 matching features · page 5 of 55

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P06029 Heptatrienenitrile 105.0564 14.44e-11
P06074 Benzo(f)quinolin-3(2H)-one, 8-chloro-1,4,4a,5,6,10b-hexahydro-4-methyl-, trans- 249.0955 18.553e-11
P06121 No candidate annotation 325.1088 11.429e-11
P06322 1D-1-Guanidino-1-deoxy-3-dehydro-scyllo-inositol 219.0850 11.645e-18
P06434 Eupaglehnin F 400.1272 11.443e-13
P06531 4-Anilino-4-oxobutanoic acid 193.0736 14.603e-13
P06843 Leptanthin 286.0773 19.206e-13
P06860 Amicoumacin A 2-phosphate 503.1696 16.429e-11
P06861 Idrapril 258.1185 12.247e-11
P07033 AICAR 338.0620 14.968e-11