Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P07033

Metabolite ID
P07033
Deionized mass
338.0620 Da
Average m/z
339.0683
Average RT
9.2669
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
133
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

133 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)6.872e-12
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)2.556e-11
Glyma.05G164700 hypothetical protein NA 2Chr05:35543931–35549196 (-)3.826e-11
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)1.278e-11
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)4.357e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)4.357e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)4.357e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)2.42e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.19e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.19e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.267e-13
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)1.481e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)5.935e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)5.935e-12
Glyma.01G175500 hypothetical protein AT3G50660:DWF4:Cytochrome P450 superfamily protein 1Chr01:51219681–51224948 (+)9.089e-11
Glyma.02G109400 hypothetical protein NA 1Chr02:10495046–10497626 (-)6.354e-11
Glyma.02G109900 hypothetical protein AT2G03150:emb1579:ATP/GTP-binding protein family 1Chr02:10547851–10557930 (+)6.354e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.566e-13
Glyma.03G041800 hypothetical protein NA 1Chr03:5307518–5311842 (+)7.434e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)9.81e-11
Glyma.04G018000 hypothetical protein AT5G42310:AT5G42310:Pentatricopeptide repeat (PPR-like) superfamily protein 1Chr04:1402993–1407323 (-)8.175e-12
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)2.016e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)5.493e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)8.028e-11
Glyma.04G237000 hypothetical protein AT1G31910:AT1G31910:GHMP kinase family protein 1Chr04:50558708–50569783 (+)5.53e-11
Glyma.04G237200 hypothetical protein AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr04:50576216–50582296 (-)5.53e-11
Glyma.04G237500 hypothetical protein AT5G15940:AT5G15940:NAD(P)-binding Rossmann-fold superfamily protein__AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold … 1Chr04:50604264–50609423 (+)5.53e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.581e-13
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)1.043e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)2.436e-15
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.363e-15
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.363e-15
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)9.106e-17
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.662e-16
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.662e-16
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.662e-16
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)3.259e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)9.834e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.287e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.27e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.439e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.848e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.321e-15
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)4.319e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.402e-15
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.402e-15
Glyma.06G126400 hypothetical protein AT5G53150:AT5G53150:DnaJ heat shock amino-terminal domain protein 1Chr06:10356650–10362151 (-)6.302e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)8.443e-15
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.004e-14
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)6.624e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)7.45e-12
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)2.779e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)4.291e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.614e-11
Glyma.08G039600 hypothetical protein NA 1Chr08:3107698–3116601 (-)5.001e-11
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)2.548e-12
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)2.548e-12
Glyma.08G149500 hypothetical protein NA 1Chr08:11460264–11465243 (-)1.461e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)6.625e-12
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)7.592e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)3.702e-14
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.02e-17
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.736e-16
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)8.456e-11
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)2.613e-12
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)4.357e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)4.357e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)4.357e-11
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)2.706e-12
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)4.357e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)4.357e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.316e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)3.827e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)8.62e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)8.621e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)8.621e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)8.62e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)2.346e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)2.346e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.468e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.468e-13
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)1.087e-12
Glyma.12G183700 hypothetical protein AT2G27600:SKD1:AAA-type ATPase family protein 1Chr12:34470517–34477475 (-)8.756e-11
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)1.769e-11
Glyma.13G055200 hypothetical protein AT3G02200:AT3G02200:Proteasome component (PCI) domain protein 1Chr13:15229290–15234025 (-)4.4e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)3.138e-11
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)6.872e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.191e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.191e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.163e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)2.205e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)4.301e-15
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)4.217e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)4.216e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)4.217e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)3.806e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)3.372e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)3.537e-18
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)6.979e-12
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)1.2e-12
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)1.2e-12
Glyma.14G072200 Ipk1 AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family pr… 1Chr14:6059598–6063755 (-)6.37e-12
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)1.008e-11
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 1Chr14:6486139–6488935 (+)3.581e-12
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 1Chr14:6498564–6506068 (+)3.581e-12
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 1Chr14:6508609–6520744 (-)3.581e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)8.897e-15
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.273e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)8.897e-15
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)8.897e-15
Glyma.15G139000 hypothetical protein NA 1Chr15:11314329–11317181 (-)4.151e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)4.94e-11
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)1.302e-12
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)1.366e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)4.894e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.342e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.64e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.534e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.78e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)4.389e-12
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)4.121e-11
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)4.968e-11
Glyma.17G205900 hypothetical protein NA 1Chr17:33578345–33582235 (-)9.922e-12
Glyma.17G206000 hypothetical protein NA 1Chr17:33582328–33583013 (-)9.922e-12
Glyma.17G206100 hypothetical protein NA 1Chr17:33612472–33622199 (-)9.922e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)1.913e-12
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)4.495e-11
Glyma.19G005800 Polyribonucleotide nucleotidyltransferase 2, mitochondrial AT5G14580:AT5G14580:polyribonucleotide nucleotidyltransferase 1Chr19:522587–531382 (-)1.973e-11
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)1.077e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.182e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.182e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.411e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)4.865e-12