SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G210400

Description hypothetical protein

Gene interval Chr16:36949685–36953467 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G73350:AT1G73350:ankyrin repeat protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1935Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0016.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1935 matching features · page 178 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P50499 Indene 116.0616 11.726e-11
P50536 Levetiracetam 170.1042 14.031e-12
P50576 Rhubafuran 176.1176 13.684e-12
P50611 (8S,10S,13S,14S,17S)-17-[2-[4-(2,6-Dipyrrolidin-1-ylpyrimidin-4-yl)piperazin-1-yl]acetyl]-10,13-dimethyl-6,7,8,12,14,15,16,17-octahydrocyclopenta[a]phenanthren-3-one 610.4085 15.027e-11
P50681 (-)-Echitoveniline 548.2492 15.428e-11
P50710 Xylocarpin A 688.2698 11.831e-11
P50714 2-Phenylethyl beta-D-glucopyranoside 284.1247 17.633e-11
P50770 No candidate annotation 195.5809 12.066e-14
P50783 Mulberrofuran O 646.2227 17.548e-11
P50835 1-dodecanoyl-2-(9Z-tetradecenoyl)-glycero-3-phosphoserine 649.3962 12.93e-13