SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G210400

Description hypothetical protein

Gene interval Chr16:36949685–36953467 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G73350:AT1G73350:ankyrin repeat protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1935Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0016.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1935 matching features · page 172 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P48467 13-Apo-beta-carotenone 258.1964 13.793e-14
P48544 N-(9Z,12Z-octadecadienoyl)-taurine 387.2440 14.172e-13
P48564 (2R)-2-[[(2R)-2-[[(2S)-2-(Azepane-1-carbonylamino)-4-methylpentanoyl]amino]-3-(1-formylindol-3-yl)propanoyl]amino]-3-(1H-indol-3-yl)propanoic acid 656.3405 13.653e-11
P48609 N-Succinyl-ala-ala-pro-phe-p-nitroanilide 624.2544 12.182e-11
P48613 Emorfazone 239.1270 18.539e-11
P48704 No candidate annotation 341.2094 12.901e-11
P48739 Dicumyl peroxide 270.1612 11.496e-13
P48807 Albocycline M-1 324.1985 11.226e-13
P48814 1-(11,12-Methyleneoctadecanoyl)-sn-glycero-2,3-cyclic phosphate 432.2624 13.968e-12
P48842 Physagulin D 620.3563 16.223e-12