Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P48807

Metabolite ID
P48807
Deionized mass
324.1985 Da
Average m/z
325.2038
Average RT
25.6377
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
58
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

58 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)1.857e-13
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)8.36e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)4.405e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)9.97e-13
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)9.534e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)9.534e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)1.607e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)6.037e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.635e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.011e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)8.898e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)5.87e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)9.378e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)9.378e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)9.378e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)8.254e-19
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)6.253e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)5.724e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)5.724e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.389e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.389e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.389e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.389e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)8.765e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.055e-13
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)7.198e-11
Glyma.11G183800 hypothetical protein AT5G22450:AT5G22450:spectrin beta chain, brain 1Chr11:25162867–25173439 (-)9.928e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)7.971e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)7.971e-12
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)8.918e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)4.207e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)4.716e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)4.716e-11
Glyma.15G108400 hypothetical protein AT1G11840:GLX1:glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 1Chr15:8534420–8539477 (-)6.346e-11
Glyma.15G108500 hypothetical protein NA 1Chr15:8535758–8538465 (+)6.346e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)7.768e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)9.451e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)7.768e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)7.768e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.037e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.339e-11
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)3.577e-11
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)4.517e-11
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)9.997e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)3.565e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)6.777e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)6.777e-11
Glyma.16G167800 hypothetical protein AT1G03190:UVH6:RAD3-like DNA-binding helicase protein 1Chr16:32772162–32778480 (+)4.323e-14
Glyma.16G208400 hypothetical protein NA 1Chr16:36789890–36801967 (-)1.878e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)9.919e-13
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)8.36e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.226e-13
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.226e-13
Glyma.19G125300 hypothetical protein AT3G56880:AT3G56880:VQ motif-containing protein__AT2G41010:CAMBP25:calmodulin (CAM)-binding protein of 25 kDa 1Chr19:38346007–38347425 (-)4.736e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)5.249e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.758e-13
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)1.649e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)3.46e-12