SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G196900

Description hypothetical protein

Gene interval Chr16:35841279–35846894 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2052Overlap
Maximum supporting SNP records5
Features with ≥2 supporting SNP records1654

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4639.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2052 matching features · page 167 of 206

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P00992 Lipoamide 205.0563 12.396e-11
P01325 7-Methoxymurrayacine 307.1223 11.688e-11
P01683 No candidate annotation 466.0571 18.387e-11
P01704 N-Isovaleryl-L-homoserine lactone 185.1079 14.329e-11
P01956 6,2'4'-Trihydroxy-2-phenylbenzofuran 242.0592 13.024e-11
P02096 No candidate annotation 514.0571 13.21e-11
P02188 Haplopine 245.0690 12.877e-11
P02500 Polanrazine B 377.1219 11.295e-12
P02515 2,5-Dimethyl-3-furanthiol acetate 170.0374 14.388e-12
P03187 N-2-Mdmn 317.0984 19.158e-11