SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G173000

Description hypothetical protein

Gene interval Chr16:33365497–33367017 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features150Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records2

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0133.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

150 matching features · page 12 of 15

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P34971 6-Methoxycrinamine 331.1434 17.475e-11
P34982 No candidate annotation 269.6102 12.259e-11
P35070 Pinocembrin 256.0727 12.997e-11
P35173 7beta-ethynyl-4a,5,6,7,8,8abeta-Hexahydro-1alpha-hydroxy-1,4ab-dimethyl-2(1H)-naphthalenone 218.1300 14.608e-14
P35207 LysoPC(6:0/0:0) 355.1768 14.103e-11
P35787 PG(a-25:0/PGD2) 944.6181 17.125e-13
P35988 Lycaconitine 668.3318 11.12e-12
P36540 Aurantiomide A 372.1814 12.757e-11
P37602 (6R)-9,10-Dihydroxy-4,7-megastigmadien-3-one-9-O-beta-D-glucopyranoside 386.1922 11.272e-11
P38332 Asprelloside I 912.5064 11.826e-11