Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34982

Metabolite ID
P34982
Deionized mass
269.6102 Da
Average m/z
270.6174
Average RT
17.5971
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
76
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

76 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)3.657e-11
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)6.667e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)3.589e-21
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)4.923e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.878e-13
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)9.627e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)6.667e-12
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)9.709e-11
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)9.756e-12
Glyma.03G169700 hypothetical protein AT2G20240:TRM17:GPI-anchored adhesin-like protein, putative (DUF3741)__AT4G28760:TRM20:methyl-coenzyme M reductase II s… 1Chr03:38442950–38448706 (+)4.456e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)3.05e-11
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)7.465e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)6.497e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)9.332e-12
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)2.821e-13
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)6.351e-11
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)8.746e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)8.746e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.928e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.548e-17
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.47e-14
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)2.398e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.124e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.124e-13
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)2.272e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)5.085e-12
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)1.546e-12
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)2.625e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)2.765e-11
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)9.503e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)6.375e-12
Glyma.09G066400 hypothetical protein AT4G29790:AT4G29790:serine/arginine repetitive matrix protein 1Chr09:6509441–6524102 (+)5.83e-11
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)4.863e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)5.211e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)2.355e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.879e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)2.102e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)3.677e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)3.677e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.745e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)5.745e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)5.745e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)2.42e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)3.318e-15
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)3.698e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.698e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.94e-14
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)4.596e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.94e-14
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.94e-14
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.445e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.275e-14
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)7.041e-12
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)1.124e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)3.657e-11
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)8.754e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)6.429e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.108e-12
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)2.189e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)5.914e-13
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)6.929e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)6.929e-11
Glyma.16G173000 hypothetical protein NA 1Chr16:33365497–33367017 (+)2.259e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)2.438e-12
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)5.852e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)1.916e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)9.941e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)9.941e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)4.937e-12
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)2.596e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.2e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.2e-13
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)4.287e-11
Glyma.20G101700 hypothetical protein AT5G08580:AT5G08580:Calcium-binding EF hand family protein 1Chr20:34467936–34475476 (-)9.286e-12
Glyma.20G105100 hypothetical protein NA 1Chr20:34737596–34737811 (-)8.603e-11