Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P38332

Metabolite ID
P38332
Deionized mass
912.5064 Da
Average m/z
913.5099
Average RT
18.9802
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
76
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

76 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 4Chr16:30652378–30659548 (+)1.51e-12
Glyma.16G196900 hypothetical protein NA 4Chr16:35841279–35846894 (-)2.578e-13
Glyma.06G312600 hypothetical protein NA 3Chr06:50110112–50120250 (+)9.78e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)7.112e-12
Glyma.16G177400 hypothetical protein NA 3Chr16:33858373–33865573 (+)9.078e-14
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)1.04e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.341e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.597e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.597e-14
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)8.749e-11
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)5.107e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.954e-12
Glyma.03G036500 WNK5 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr03:4402746–4408323 (+)8.159e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)9.351e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.885e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.399e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)8.23e-12
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)8.213e-12
Glyma.08G149500 hypothetical protein NA 1Chr08:11460264–11465243 (-)2.646e-11
Glyma.08G150000 hypothetical protein AT2G32850:AT2G32850:Protein kinase superfamily protein 1Chr08:11518864–11523442 (-)1.25e-11
Glyma.08G150300 hypothetical protein NA 1Chr08:11550134–11555581 (+)7.571e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)2.878e-13
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)1.489e-12
Glyma.09G252000 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 1Chr09:47233101–47242848 (+)3.156e-11
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 1Chr09:47254519–47261787 (-)3.156e-11
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)8.326e-11
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)1.671e-11
Glyma.11G162500 hypothetical protein AT2G40435:AT2G40435:transcription factor SCREAM-like protein 1Chr11:15087390–15090683 (-)6.081e-11
Glyma.11G240600 hypothetical protein NA 1Chr11:33491895–33493311 (+)1.627e-13
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.354e-14
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.354e-14
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)1.519e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.498e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.501e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)2.501e-12
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)1.868e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)7.112e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)4.177e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)9.646e-14
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)9.646e-14
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.597e-14
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)9.01e-14
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.589e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)9.01e-14
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)9.01e-14
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.504e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)5.676e-11
Glyma.16G173000 hypothetical protein NA 1Chr16:33365497–33367017 (+)1.826e-11
Glyma.16G176900 hypothetical protein NA 1Chr16:33828244–33834767 (+)9.078e-14
Glyma.16G177000 hypothetical protein NA 1Chr16:33837701–33839617 (-)9.078e-14
Glyma.16G177100 hypothetical protein AT5G62650:AT5G62650:Tic22-like family protein 1Chr16:33846088–33852563 (-)9.495e-12
Glyma.16G177300 hypothetical protein AT4G21190:emb1417:Pentatricopeptide repeat (PPR) superfamily protein 1Chr16:33854518–33857573 (-)9.495e-12
Glyma.16G177500 hypothetical protein AT5G52790:AT5G52790:CBS domain protein with a domain protein (DUF21) 1Chr16:33867232–33871770 (-)2.599e-12
Glyma.16G177600 hypothetical protein AT1G64700:AT1G64700:DUF4228 domain protein 1Chr16:33874012–33875343 (-)6.811e-12
Glyma.16G177700 hypothetical protein NA 1Chr16:33877620–33880324 (-)2.599e-12
Glyma.16G177800 hypothetical protein AT5G52780:AT5G52780:transmembrane protein, putative (DUF3464) 1Chr16:33882991–33884754 (+)6.46e-13
Glyma.16G178000 hypothetical protein NA 1Chr16:33901523–33902676 (-)2.807e-11
Glyma.16G178700 hypothetical protein AT5G52660:AT5G52660:Homeodomain-like superfamily protein 1Chr16:33941617–33948775 (+)9.183e-12
Glyma.16G178900 hypothetical protein AT4G25720:QC:glutaminyl cyclase 1Chr16:33954446–33960344 (+)4.018e-14
Glyma.16G179200 hypothetical protein AT5G24020:MIND:septum site-determining protein (MIND) 1Chr16:33985333–33987059 (-)4.46e-13
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.079e-29
Glyma.16G180200 hypothetical protein NA 1Chr16:34077613–34081734 (+)6.861e-16
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)2.615e-13
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)1.038e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr16:35831912–35835153 (+)4.565e-11
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 1Chr17:36142245–36146771 (-)2.597e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)8.749e-11
Glyma.17G258400 hypothetical protein AT1G30755:AT1G30755:elongation factor G, putative (DUF668) 1Chr17:41248979–41254225 (+)7.102e-12
Glyma.18G019900 hypothetical protein AT5G65205:AT5G65205:NAD(P)-binding Rossmann-fold superfamily protein__AT5G10050:AT5G10050:NAD(P)-binding Rossmann-fold … 1Chr18:1470650–1473673 (-)1.809e-13
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)6.252e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)5.508e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.892e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.892e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)9.32e-11
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)5.141e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)3.983e-11