Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P35070

Metabolite ID
P35070
Deionized mass
256.0727 Da
Average m/z
257.0802
Average RT
17.6332
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
50
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

50 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G031900 hypothetical protein AT5G62600:MOS14:ARM repeat superfamily protein 2Chr05:2767384–2787627 (+)1.012e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)8.251e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)9.878e-13
Glyma.16G177400 hypothetical protein NA 2Chr16:33858373–33865573 (+)6.368e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.324e-11
Glyma.05G103700 hypothetical protein NA 1Chr05:27632520–27637991 (+)3.589e-13
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)2.967e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.277e-12
Glyma.08G104600 hypothetical protein AT1G27930:AT1G27930:glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 1Chr08:8045602–8047222 (-)6.674e-11
Glyma.08G107800 AK-HSDH aspartokinase-homoserine dehydrogenase AT4G19710:AK-HSDH II:aspartate kinase-homoserine dehydrogenase ii 1Chr08:8296196–8307328 (-)7.413e-11
Glyma.08G108400 hypothetical protein NA 1Chr08:8326311–8330206 (+)7.413e-11
Glyma.08G109000 SUB1 NA 1Chr08:8364770–8373803 (-)9.732e-11
Glyma.08G110000 hypothetical protein AT3G23840:AT3G23840:HXXXD-type acyl-transferase family protein 1Chr08:8438346–8442806 (-)9.732e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)3.61e-12
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)1.432e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)3.145e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.116e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)1.676e-11
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)4.947e-11
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)7.828e-12
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)3.229e-13
Glyma.10G238300 hypothetical protein AT5G07240:IQD24:IQ-domain 24 1Chr10:46688122–46693051 (-)8.463e-11
Glyma.10G238700 hypothetical protein NA 1Chr10:46721439–46725173 (+)8.462e-11
Glyma.10G239000 hypothetical protein NA 1Chr10:46755702–46757579 (-)8.463e-11
Glyma.11G061800 hypothetical protein NA 1Chr11:4632831–4633552 (+)6.615e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.94e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.94e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.142e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)9.878e-13
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.015e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.844e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.015e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.015e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)3.521e-13
Glyma.16G173000 hypothetical protein NA 1Chr16:33365497–33367017 (+)2.997e-11
Glyma.16G176900 hypothetical protein NA 1Chr16:33828244–33834767 (+)6.368e-11
Glyma.16G177000 hypothetical protein NA 1Chr16:33837701–33839617 (-)6.368e-11
Glyma.16G179100 BCH2 beta-carotene hydroxylase BCH2 AT4G25700:BETA-OHASE 1:beta-hydroxylase 1__AT5G52570:BETA-OHASE 2:beta-carotene hydroxylase 2 1Chr16:33969618–33972333 (-)6.28e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.908e-17
Glyma.16G180200 hypothetical protein NA 1Chr16:34077613–34081734 (+)4.267e-12
Glyma.16G180400 hypothetical protein AT5G23950:AT5G23950:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr16:34093033–34094634 (+)7.454e-12
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)4.126e-11
Glyma.16G197200 hypothetical protein NA 1Chr16:35854742–35861472 (-)1.199e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)2.648e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)3.961e-11
Glyma.18G091600 hypothetical protein NA 1Chr18:9165090–9166656 (-)5.732e-14
Glyma.18G300500 hypothetical protein NA 1Chr18:57841316–57843280 (+)3.023e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.449e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.449e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)2.116e-11