SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G139000

Description hypothetical protein

Gene interval Chr16:29623540–29631451 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1430Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records117

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0818.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1430 matching features · page 130 of 143

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P46909 Racemoside B 886.4934 15.67e-11
P46925 3-Hydroxyisorenieratene 544.3721 15.385e-12
P46992 2-Amino-4-hydroxy-6,7-dimethyl-5,6,7,8-tetrahydropteridine 195.1118 14.317e-12
P47028 PS(20:5(5Z,8Z,11Z,14Z,17Z)/22:6(4Z,7Z,11E,13Z,15E,19Z)-2OH(10S,17)) 885.4715 13.736e-12
P47150 17alpha-Methylestradiol 286.1937 12.548e-11
P47152 Flavadine 417.2473 19.469e-12
P47190 No candidate annotation 586.7840 11.665e-12
P47225 Planktocyclin 800.4334 13.379e-11
P47349 No candidate annotation 797.9366 15.643e-11
P47379 2-Amino-4-hydroxy-6,7-dimethyl-5,6,7,8-tetrahydropteridine 195.1146 16.931e-13