Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P47028

Metabolite ID
P47028
Deionized mass
885.4715 Da
Average m/z
886.4813
Average RT
24.4758
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
54
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

54 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)2.943e-12
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)5.46e-11
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 2Chr07:9523110–9526319 (+)8.49e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.553e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 2Chr16:30514629–30519598 (+)8.523e-12
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)1.352e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)1.95e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)2.156e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.56e-13
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)4.377e-12
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)6.591e-11
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)7.565e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.491e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.309e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.558e-13
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)5.526e-13
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)1.569e-12
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)1.135e-11
Glyma.07G223600 hypothetical protein NA 1Chr07:40077049–40082294 (+)1.315e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.305e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)5.026e-11
Glyma.09G066400 hypothetical protein AT4G29790:AT4G29790:serine/arginine repetitive matrix protein 1Chr09:6509441–6524102 (+)3.44e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)3.648e-11
Glyma.11G241300 hypothetical protein AT4G39990:RABA4B:RAB GTPase homolog A4B 1Chr11:33552339–33555298 (+)7.754e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)7.622e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)4.853e-15
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)8.312e-14
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.588e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)8.312e-14
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)8.312e-14
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.033e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.018e-12
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)1.89e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)2.215e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)2.943e-12
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)5.202e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.172e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.966e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.305e-11
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)2.986e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)3.736e-12
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)9.83e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.07e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)1.313e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)6.816e-14
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)6.816e-14
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)1.352e-11
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)6.72e-13
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)8.951e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)1.102e-13
Glyma.18G231500 hypothetical protein NA 1Chr18:52019138–52019828 (-)1.889e-11
Glyma.18G251000 hypothetical protein NA 1Chr18:53738009–53740714 (+)7.568e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.828e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.828e-12