Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P47150

Metabolite ID
P47150
Deionized mass
286.1937 Da
Average m/z
287.2002
Average RT
24.5680
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
68
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

68 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 4Chr16:30864919–30872425 (+)5.004e-12
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)4.843e-11
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)9.815e-15
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)2.442e-12
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)4.621e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 2Chr19:1155711–1161298 (-)2.699e-18
Glyma.19G012300 hypothetical protein NA 2Chr19:1165111–1173031 (-)2.699e-18
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.021e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)6.522e-11
Glyma.02G115900 hypothetical protein AT1G26480:GRF12:ral regulatory factor 12 1Chr02:11280858–11285984 (+)6.947e-15
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)4.624e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)8.547e-16
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)1.106e-12
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)6.384e-15
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.112e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.997e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.265e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)6.807e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)6.807e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)6.807e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.277e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.277e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)4.109e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)2.702e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)1.379e-12
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)5.92e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)5.556e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.502e-16
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.171e-15
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)4.712e-11
Glyma.10G274700 hypothetical protein AT1G68560:XYL1:alpha-xylosidase 1__AT3G45940:AT3G45940:Glycosyl hydrolases family 31 protein 1Chr10:49769554–49774168 (-)1.217e-12
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)1.503e-13
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)1.503e-13
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)1.503e-13
Glyma.11G239000 hypothetical protein AT5G10120:AT5G10120:Ethylene insensitive 3 family protein 1Chr11:33337797–33339122 (-)7.335e-11
Glyma.12G007700 hypothetical protein NA 1Chr12:563263–567108 (-)7.88e-11
Glyma.12G007800 hypothetical protein NA 1Chr12:572469–583974 (+)8.521e-11
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)1.766e-15
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)6.097e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)6.097e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)4.086e-11
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)1.016e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)6.431e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.193e-16
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)4.22e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)9.193e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)9.193e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)6.038e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)8.49e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)6.038e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)6.038e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.736e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.035e-13
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)7.231e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)5.961e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)2.548e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.161e-13
Glyma.16G143400 hypothetical protein NA 1Chr16:30337469–30338390 (-)3.971e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)7.296e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)3.25e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)4.843e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)4.666e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)3.379e-12
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)6.728e-12
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)1.34e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)1.34e-12
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)1.881e-11
Glyma.20G112900 hypothetical protein AT2G39210:AT2G39210:Major facilitator superfamily protein 1Chr20:35498179–35500565 (-)4.484e-12