SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G117700

Description hypothetical protein

Gene interval Chr16:26279957–26283458 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features456Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

456 matching features · page 6 of 46

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P05821 Pandangolide 3 362.1408 13.606e-12
P05844 Octanedioylcarnitine 317.1879 16.087e-11
P05856 Midodrine 254.1227 11.246e-11
P05983 No candidate annotation 405.6379 12.768e-17
P06071 Proteacin 473.1514 11.36e-12
P06122 No candidate annotation 769.2075 17.545e-12
P06146 4-Formylsalicylic acid 166.0251 17.25e-11
P06167 Methyl (2R,3R)-2-[(3-carbamimidoylphenyl)methyl]-3-[[4-(1-oxidopyridin-1-ium-4-yl)benzoyl]amino]butanoate 446.1948 15.347e-12
P06381 6',7'-Dihydroxybergamottin 372.1547 19.669e-13
P06695 Glycoperine 391.1328 12.54e-11