Overview Annotation GWAS Evidence Associated genes

P05844

Metabolite ID
P05844
Deionized mass
317.1879 Da
Average m/z
318.1957
Average RT
8.8399
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
139
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

139 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.888e-14
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 3Chr10:48805999–48811533 (-)3.388e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)5.553e-13
Glyma.14G170900 hypothetical protein AT1G78060:AT1G78060:Glycosyl hydrolase family protein 3Chr14:42298358–42306613 (-)6.371e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)3.853e-14
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)4.426e-11
Glyma.16G196900 hypothetical protein NA 3Chr16:35841279–35846894 (-)1.041e-13
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)1.303e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)4.197e-13
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)3.912e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.889e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.889e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)5.201e-12
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 2Chr16:26057276–26069534 (+)1.004e-13
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)1.313e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.888e-14
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)1.921e-12
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)8.426e-11
Glyma.01G117000 hypothetical protein NA 1Chr01:40366281–40370122 (+)4.144e-11
Glyma.01G117200 hypothetical protein NA 1Chr01:40497525–40501709 (-)4.144e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)7.285e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)7.285e-11
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)5.64e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)8.269e-14
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)2.441e-14
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)2.192e-14
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.227e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.557e-11
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)8.827e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)5.544e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)8.973e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)8.973e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)7.016e-16
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)6.365e-15
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)6.365e-15
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)6.365e-15
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.541e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)5.523e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.505e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.502e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.334e-12
Glyma.06G085900 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr06:6617102–6622706 (-)3.11e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)5.294e-13
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)5.294e-13
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)5.293e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.216e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.216e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)4.304e-13
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)4.135e-12
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)2.248e-13
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 1Chr06:16709212–16710732 (-)2.07e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)4.197e-13
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)4.197e-13
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)4.197e-13
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)4.197e-13
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)6.104e-12
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)3.63e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)4.907e-12
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)9.378e-12
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)4.308e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)7.103e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.642e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.485e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.485e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.485e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.485e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.352e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)4.874e-13
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)5.034e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)3.217e-13
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)3.217e-13
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)3.217e-13
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)3.217e-13
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)5.17e-14
Glyma.12G007800 hypothetical protein NA 1Chr12:572469–583974 (+)3.404e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.28e-14
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.28e-14
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)3.127e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.432e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)6.26e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)8.231e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)8.231e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)5.553e-13
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)5.669e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.696e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.695e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.889e-12
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)3.28e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)8.011e-11
Glyma.14G171100 hypothetical protein NA 1Chr14:42357087–42363791 (-)6.371e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)5.201e-12
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)5.421e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.851e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)5.914e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.851e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.851e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.549e-12
Glyma.15G216700 hypothetical protein NA 1Chr15:35649229–35652466 (-)9.294e-12
Glyma.15G216900 hypothetical protein NA 1Chr15:35680524–35686654 (-)9.294e-12
Glyma.15G217100 hypothetical protein NA 1Chr15:35830853–35832075 (-)9.294e-12
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 1Chr15:48661607–48665946 (-)4.42e-11
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)2.845e-12
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)2.845e-12
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)1.64e-12
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:5656328–5663040 (-)6.512e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)1.64e-12
Glyma.16G117000 hypothetical protein NA 1Chr16:26140411–26140830 (+)9.452e-11
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)6.087e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)4.426e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)4.426e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)4.361e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.867e-15
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)6.392e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)2.612e-15
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)5.975e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)6.723e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)6.723e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)2.239e-13
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)2.239e-13
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)7.89e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)9.467e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)1.303e-12
Glyma.17G218800 Peptidyl-prolyl cis-trans isomerase CYP57 AT4G33060:AT4G33060:Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 1Chr17:37027171–37033720 (-)2.478e-11
Glyma.17G258400 hypothetical protein AT1G30755:AT1G30755:elongation factor G, putative (DUF668) 1Chr17:41248979–41254225 (+)6.693e-11
Glyma.18G006800 hypothetical protein AT1G67370:ASY1:DNA-binding HORMA family protein 1Chr18:495989–502111 (-)4.585e-11
Glyma.19G027700 hypothetical protein AT5G15440:EDL1:EID1-like 1 1Chr19:3471299–3475645 (+)4.577e-13
Glyma.19G028100 hypothetical protein AT3G01040:GAUT13:galacturonosyltransferase 13 1Chr19:3511914–3519141 (+)1.754e-13
Glyma.19G102000 ICE2 AT3G26744:ICE1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr19:34998146–35001862 (+)1.417e-11
Glyma.19G102200 hypothetical protein AT2G31410:AT2G31410:coiled-coil protein 1Chr19:35024582–35025690 (+)1.417e-11
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)6.047e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)2.191e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)4.329e-13
Glyma.20G106400 hypothetical protein AT5G23590:AT5G23590:DNAJ heat shock N-terminal domain-containing protein 1Chr20:34888699–34893605 (-)2.364e-11
Glyma.20G106800 hypothetical protein AT4G38520:AT4G38520:Protein phosphatase 2C family protein__AT3G51370:AT3G51370:Protein phosphatase 2C family protein 1Chr20:34935548–34940516 (-)1.038e-12
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)4.514e-14
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)3.982e-13
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)3.602e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)3.868e-11
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)1.896e-12