SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G117700

Description hypothetical protein

Gene interval Chr16:26279957–26283458 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features456Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

456 matching features · page 36 of 46

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P40346 No candidate annotation 570.1408 14.542e-11
P40359 Albocycline M-1 324.2001 12.766e-12
P40405 No candidate annotation 659.3981 13.558e-11
P40520 17alpha-Methylestradiol 286.1913 11.702e-12
P40650 Parrisaponin 1014.5297 18.825e-11
P40695 Bacopasaponin A 736.4305 15.301e-12
P40703 Clofoctol 364.1357 15.74e-12
P40997 (-)-Sonderianol 298.1892 13.352e-12
P41012 Tylosin 915.5183 12.08e-11
P41069 DG(2:0/22:6(4Z,8Z,10Z,13Z,16Z,19Z)-OH(7)/0:0) 460.2787 15.388e-12