SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G117400

Description hypothetical protein

Gene interval Chr16:26234552–26238233 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3001Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records425

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1416.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3001 matching features · page 282 of 301

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P48704 No candidate annotation 341.2094 12.089e-11
P48752 Apronal 184.1230 12.214e-11
P48814 1-(11,12-Methyleneoctadecanoyl)-sn-glycero-2,3-cyclic phosphate 432.2624 15.416e-11
P48869 (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine 204.1465 12.002e-11
P48941 Chlorphentermine 183.0837 19.708e-12
P48944 Antibiotic BU 3292TA 644.3481 13.247e-11
P49009 1,2-dihexanoyl-sn-glycero-3-phosphate 368.1595 11.417e-11
P49020 S-(PGA1)-glutathione 643.3213 18.454e-12
P49100 Glucoerysodine 461.2087 11.083e-11
P49144 d-Phenylalanyl-l-prolyl-l-arginyl-chloromethyl ketone 926.4041 12.526e-12