Overview Annotation GWAS Evidence Associated genes

P49020

Metabolite ID
P49020
Deionized mass
643.3213 Da
Average m/z
644.3343
Average RT
25.7926
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.15G140400 hypothetical protein NA 2Chr15:11495189–11495691 (+)8.676e-13
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 2Chr16:35170253–35173950 (-)2.303e-11
Glyma.01G010200 hypothetical protein AT1G32060:PRK:phosphoribulokinase 1Chr01:993024–997480 (-)1.211e-11
Glyma.01G017900 hypothetical protein NA 1Chr01:1734474–1735545 (+)3.496e-11
Glyma.02G138200 hypothetical protein NA 1Chr02:14307786–14310106 (-)8.27e-11
Glyma.03G169700 hypothetical protein AT2G20240:TRM17:GPI-anchored adhesin-like protein, putative (DUF3741)__AT4G28760:TRM20:methyl-coenzyme M reductase II s… 1Chr03:38442950–38448706 (+)5.99e-11
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 1Chr07:6270176–6283087 (-)3.934e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)8.45e-11
Glyma.15G140500 hypothetical protein NA 1Chr15:11496139–11502209 (-)8.819e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)8.454e-12
Glyma.16G189500 hypothetical protein NA 1Chr16:35202920–35206459 (-)9.526e-15