SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G117400

Description hypothetical protein

Gene interval Chr16:26234552–26238233 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3001Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records425

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1416.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3001 matching features · page 265 of 301

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P44277 7-O-Methyl-ganoderic acid O 644.3939 11.14e-11
P44287 9-hydroxy-5Z-nonenoic acid 172.1122 13.001e-13
P44340 1-(6Z,9Z,12Z-octadecatrienoyl)-glycero-3-phosphoserine 519.2543 15.398e-11
P44378 Malyngamide P 457.2574 12.31e-13
P44407 2-[[9-(1-Methylethyl)-6-[(phenylmethyl)amino]-9H-purin-2-yl]amino]-1-butanol 354.2160 12.366e-12
P44438 Benzenepropanoic acid, 4-hydroxy-alpha-(2-((3-(hydroxyamino)-3-oxo-1-(phenylmethyl)propyl)amino)-2-oxoethyl)-3-iodo- 526.0601 11.14e-13
P44451 Pulchellamine C 479.2179 19.816e-11
P44452 isosalanninolide 628.2840 18.128e-11
P44460 N-(28-(9Z,12Z-octadecadienoyloxy)-octacosanoyl)-docosasphinganine 1042.0131 16.276e-12
P44472 Ganglioside GT1c (d18:1/16:0) 2099.0215 11.825e-12