Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P44340

Metabolite ID
P44340
Deionized mass
519.2543 Da
Average m/z
520.2615
Average RT
22.5711
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
65
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

65 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.019e-13
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 2Chr08:11525692–11536927 (+)1.139e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)8.68e-17
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2Chr12:36289704–36295084 (-)1.312e-14
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)7.062e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.249e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.249e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)2.095e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 2Chr16:30514629–30519598 (+)2.415e-13
Glyma.16G145100 hypothetical protein NA 2Chr16:30578388–30581421 (-)8.81e-16
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)1.71e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.505e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.505e-13
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)3.894e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)9.196e-11
Glyma.02G295900 hypothetical protein NA 1Chr02:47375932–47378006 (+)6.684e-11
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 1Chr02:47383044–47395946 (-)6.684e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.845e-11
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)2.648e-11
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)2.036e-12
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)3.302e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)9.359e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.019e-13
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.019e-13
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.019e-13
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.019e-13
Glyma.08G150000 hypothetical protein AT2G32850:AT2G32850:Protein kinase superfamily protein 1Chr08:11518864–11523442 (-)7.504e-11
Glyma.08G338200 hypothetical protein NA 1Chr08:45509289–45511145 (+)1.134e-11
Glyma.08G338600 hypothetical protein NA 1Chr08:45522321–45523727 (-)1.134e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)1.134e-11
Glyma.09G099500 hypothetical protein AT1G16310:AT1G16310:Cation efflux family protein 1Chr09:18099034–18105167 (+)7.348e-12
Glyma.09G099600 hypothetical protein NA 1Chr09:18100113–18100745 (+)7.348e-12
Glyma.09G099800 hypothetical protein NA 1Chr09:18134075–18134470 (-)7.349e-12
Glyma.09G202900 hypothetical protein AT5G10560:AT5G10560:Glycosyl hydrolase family protein 1Chr09:42685911–42690981 (-)8.577e-13
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)2.694e-12
Glyma.09G252000 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 1Chr09:47233101–47242848 (+)5.397e-11
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 1Chr09:47254519–47261787 (-)5.397e-11
Glyma.12G198700 hypothetical protein AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr12:36001658–36004086 (+)1.354e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)8.68e-17
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)5.999e-11
Glyma.13G049100 hypothetical protein NA 1Chr13:14498952–14506408 (-)1.324e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)7.062e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)3.756e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)3.756e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.249e-13
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)2.095e-11
Glyma.14G176600 hypothetical protein NA 1Chr14:43565478–43570243 (+)1.357e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)2.062e-12
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)1e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)4.886e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)8.057e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.398e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.328e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.53e-12
Glyma.16G128400 hypothetical protein AT4G36050:AT4G36050:endonuclease/exonuclease/phosphatase family protein 1Chr16:28049652–28054520 (-)1.351e-11
Glyma.16G141300 hypothetical protein AT4G36710:HAM4:GRAS family transcription factor 1Chr16:29937044–29939337 (+)1.743e-11
Glyma.16G141600 hypothetical protein AT5G66710:AT5G66710:Protein kinase superfamily protein__AT3G50720:AT3G50720:Protein kinase superfamily protein 1Chr16:29970884–29978773 (-)1.742e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)5.229e-17
Glyma.16G144900 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr16:30549575–30553059 (+)5.671e-14
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)2.094e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)8.811e-16
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)2.162e-14
Glyma.16G147400 hypothetical protein NA 1Chr16:30817535–30821568 (+)6.246e-12
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)5.867e-12
Glyma.17G258400 hypothetical protein AT1G30755:AT1G30755:elongation factor G, putative (DUF668) 1Chr17:41248979–41254225 (+)8.461e-11