Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P44277

Metabolite ID
P44277
Deionized mass
644.3939 Da
Average m/z
645.3994
Average RT
22.5188
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
66
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

66 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)1.491e-11
Glyma.14G171400 hypothetical protein NA 2Chr14:42398866–42404627 (+)2.272e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.049e-14
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)2.181e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)2.072e-11
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)2.008e-11
Glyma.03G034200 hypothetical protein NA 1Chr03:3989072–3993561 (+)2.645e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.465e-11
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)2.33e-13
Glyma.05G220900 hypothetical protein NA 1Chr05:40040654–40043504 (+)3.232e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)5.427e-11
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)2.46e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.59e-13
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.584e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.584e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.584e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.082e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.082e-12
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)2.865e-12
Glyma.06G276300 hypothetical protein NA 1Chr06:46741410–46744086 (-)8.548e-11
Glyma.06G285400 hypothetical protein AT1G06290:ACX3:acyl-CoA oxidase 3 1Chr06:47399250–47406151 (+)5.41e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)9.752e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)2.42e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)9.752e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)9.752e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)2.42e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)6.754e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)6.754e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)4.025e-11
Glyma.08G142200 hypothetical protein NA 1Chr08:10833827–10834390 (-)3.827e-13
Glyma.08G142400 WRKY6 WRKY transcription factor 6 NA 1Chr08:10843433–10846761 (-)3.827e-13
Glyma.08G142500 hypothetical protein NA 1Chr08:10848944–10850129 (+)1.038e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)2.264e-13
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)6.933e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)1.646e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)1.646e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)1.646e-11
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)6.647e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)1.814e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.978e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)7.96e-12
Glyma.14G171200 hypothetical protein AT1G19970:AT1G19970:ER lumen protein retaining receptor family protein 1Chr14:42387905–42389129 (+)2.272e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.049e-14
Glyma.15G069700 hypothetical protein AT1G11120:AT1G11120:CTTNBP 2 amino-terminal-like protein 1Chr15:5327863–5332137 (-)5.283e-11
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)1.092e-15
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)1.092e-15
Glyma.15G107500 hypothetical protein NA 1Chr15:8435042–8443925 (+)4e-11
Glyma.15G107800 hypothetical protein AT1G64570:DUO3:Homeodomain-like superfamily protein 1Chr15:8473049–8483746 (+)6.63e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.095e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.766e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.095e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.095e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)7.485e-12
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)1.382e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.14e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)9.151e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)9.999e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)8.049e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)2.408e-11
Glyma.18G179200 hypothetical protein NA 1Chr18:43222934–43228759 (-)1.341e-14
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)7.916e-11
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)1.556e-11
Glyma.19G128100 hypothetical protein NA 1Chr19:38728037–38732422 (+)2.094e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)8.285e-15
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)2.768e-13
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)3.162e-12